myRT

myRT report for GCA_001059715.1_ASM105971v1

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Seq: JULB01000300.1 Escherichia coli strain 982_ECOL 1143_2272_76759, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JULB01000039.1 Escherichia coli strain 982_ECOL 162_25362_437431, whole genome shotgun sequence (25362 bp)
Overview 1 RT 1: 15461-19744 bp Neighborhood of RT #1 [15461, 19752] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 15461-16366 bp Feature: gene Location: 16504-16695 bp Feature: gene Location: 16852-17391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17182-17260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17182 -172 60 bp Feature: gene Location: 17419-17940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17425-17707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1742 5-17707 bp Feature: domain Description: GIIM Note: maturase Location: 17755-17935 bp Feature: domain Description: GIIM Note: maturase Location: 17755-17935 bp Feature: gene Location: 18262-18450 bp Feature: gene Location: 18490-19752 bp Feature: domain Description: YesM Location: 19003-19744 bp Feature: domain Description: YesM Location: 19003-19744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: JULB01000082.1 Escherichia coli strain 982_ECOL 315_155967_2566744, whole genome shotgun sequence (155967 bp)
Overview 1 RT 1: 127655-133686 bp Neighborhood of RT #1 [127655, 133686] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 127655-128575 bp Feature: domain Description: AbiEii Location: 127697-128438 bp Feature: domain Description: AbiEii Location: 127697-12843 8 bp Feature: gene Location: 128562-129365 bp Feature: domain Description: AbiEi_3_N Location: 128595-128856 bp Feature: domain Description: AbiEi_3 _N Location: 128595-128856 bp Feature: domain Description: AbiEi_3 Location: 128868-129324 bp Feature: domain Description: AbiEi_3 Location: 128868-1293 24 bp Feature: gene Location: 129660-132869 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130188-130677 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 0188-13 0677 bp Feature: domain Description: nitrilase Location: 132183-132780 bp Feature: domain Description: nitrilase Location: 13 2183 -13 2780 bp Feature: gene Location: 133030-133170 bp Feature: domain Description: Phage_ASH Location: 133057-133150 bp Feature: domain Description: Phage_ASH Location: 13 3 057-13 3 150 bp Feature: gene Location: 133216-133686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)