myRT

myRT report for GCA_001059755.1_ASM105975v1

Download annotations/find similar RTs

Seq: JUKT01000136.1 Enterococcus faecium strain 990_EFCM 472_4619_69170, whole genome shotgun sequence (4619 bp)
Overview 1 RT 1: 1-4617 bp Neighborhood of RT #1 [1, 4616] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 1-258 bp Feature: domain Description: RelB_DinJ Location: 124-250 bp Feature: domain Description: RelB_DinJ Location: 1 24-250 bp Feature: gene Location: 327-1343 bp Feature: domain Description: FtsK_SpoIIIE Location: 984-1224 bp Feature: domain Description: FtsK_SpoIIIE Location: 984-1 224 bp Feature: gene Location: 1937-3811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2303-2999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2303-2999 bp Feature: domain Description: HNHc Note: nucleases Location: 3539-3698 bp Feature: domain Description: HNHc Note: nucleases Location: 3539-3698 bp Feature: gene Location: 3913-4293 bp Feature: domain Description: FtsK Location: 3928-4168 bp Feature: domain Description: FtsK Location: 3928-41 68 bp Feature: gene Location: 4338-4616 bp Feature: domain Description: Dcm Location: 4341-4617 bp Feature: domain Description: Dcm Location: 4341 -461 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: JUKT01000137.1 Enterococcus faecium strain 990_EFCM 476_3345_87928, whole genome shotgun sequence (3345 bp)
Overview 1 RT 1: 26-3285 bp Neighborhood of RT #1 [26, 3317] RVT-AbiP2 HsdM Feature: gene Location: 26-1501 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 374-839 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 374-839 bp Feature: gene Location: 1839-3317 bp Feature: domain Description: HsdM Location: 1860-3285 bp Feature: domain Description: HsdM Location: 1860-32 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: JUKT01000144.1 Enterococcus faecium strain 990_EFCM 510_8825_124765, whole genome shotgun sequence (8825 bp)
Overview 1 RT 1: 3377-8764 bp Neighborhood of RT #1 [3377, 8778] TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 3377-3766 bp Feature: domain Description: TcpE Location: 3395-3695 bp Feature: domain Description: TcpE Location: 3 3 95-3 695 bp Feature: gene Location: 3753-5303 bp Feature: domain Description: AAA_10 Location: 5082-5265 bp Feature: domain Description: AAA_10 Location: 5082-5265 bp Feature: gene Location: 6000-7826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6300-6999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 00-6999 bp Feature: gene Location: 7960-8778 bp Feature: domain Description: AAA_10 Location: 7966-8764 bp Feature: domain Description: AAA_10 Location: 7966-8764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII