myRT

myRT report for GCA_001059825.1_ASM105982v1

Download annotations/find similar RTs

Seq: JUOX01000494.1 Bacillus cereus strain 896_BCER 1423_24463_508148, whole genome shotgun sequence (24463 bp)
Overview 1 RT 1: 13015-22574 bp Neighborhood of RT #1 [13015, 22574] RVT-GII HNHc RVT_N RVT-GII GIIM HNH DEXDc Feature: gene Location: 13015-13713 bp Feature: gene Location: 13730-14485 bp Feature: gene Location: 14605-16503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14929-15667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4929-1 5667 bp Feature: domain Description: HNHc Note: nucleases Location: 16246-16393 bp Feature: domain Description: HNHc Note: nucleases Location: 1 6246-1 6393 bp Feature: gene Location: 17355-19166 bp Feature: RT Description: RVT_N Location: 17409-17655 bp Feature: RT Description: RVT_N Location: 1 7409-1 7655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17709-18363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7709-1 8363 bp Feature: domain Description: GIIM Note: maturase Location: 18426-18660 bp Feature: domain Description: GIIM Note: maturase Location: 1 8426-1 8660 bp Feature: domain Description: HNH Note: nucleases Location: 18900-19035 bp Feature: domain Description: HNH Note: nucleases Location: 1 8900-1 9035 bp Feature: gene Location: 19738-22323 bp Feature: domain Description: DEXDc Location: 20515-21469 bp Feature: domain Description: DEXDc Location: 2051 5-21 469 bp Feature: gene Location: 22383-22574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388), HNH (pfam01844), DEXDc (smart00487)

Seq: JUOX01000550.1 Bacillus cereus strain 896_BCER 1571_21520_535935, whole genome shotgun sequence (21520 bp)
Overview 1 RT 1: 7506-16295 bp Neighborhood of RT #1 [7506, 16295] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 7506-8477 bp Feature: domain Description: TraC-F-type Location: 7926-8400 bp Feature: domain Description: TraC-F-type Location: 792 6-8400 bp Feature: gene Location: 8624-8800 bp Feature: gene Location: 9193-11025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9493-10198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9493-10198 bp Feature: domain Description: HNHc Note: nucleases Location: 10777-10909 bp Feature: domain Description: HNHc Note: nucleases Location: 10777-10909 bp Feature: gene Location: 11316-12284 bp Feature: domain Description: TraC-F-type Location: 11343-12123 bp Feature: domain Description: TraC-F-type Location: 11343-12 12 3 bp Feature: gene Location: 12315-16295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: JUOX01000143.1 Bacillus cereus strain 896_BCER 405_24747_485038, whole genome shotgun sequence (24747 bp)
Overview 1 RT 1: 2556-11671 bp Neighborhood of RT #1 [2556, 11671] rpsA nuc_hydro RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 2556-3539 bp Feature: domain Description: rpsA Location: 2823-3360 bp Feature: domain Description: rpsA Location: 2823 -3 3 60 bp Feature: gene Location: 4133-5104 bp Feature: domain Description: nuc_hydro Location: 4169-5075 bp Feature: domain Description: nuc_hydro Location: 4169-5075 bp Feature: gene Location: 5824-7470 bp Feature: RT Description: RVT_N Location: 5866-6103 bp Feature: RT Description: RVT_N Location: 5866-6103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6157-6817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6157-6817 bp Feature: domain Description: GIIM Note: maturase Location: 6886-7117 bp Feature: domain Description: GIIM Note: maturase Location: 6886-7117 bp Feature: gene Location: 7683-11183 bp Feature: domain Description: TraG-D_C Location: 9300-9660 bp Feature: domain Description: TraG-D_C Location: 93 00-9660 bp Feature: domain Description: Ftsk_gamma Location: 10068-10245 bp Feature: domain Description: Ftsk_gamma Location: 10068-10245 bp Feature: domain Description: Ftsk_gamma Location: 10377-10512 bp Feature: domain Description: Ftsk_gamma Location: 103 77-10512 bp Feature: gene Location: 11201-11671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), nuc_hydro (cl00226), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: JUOX01000035.1 Bacillus cereus strain 896_BCER 96_11083_213713, whole genome shotgun sequence (11083 bp)
Overview 1 RT 1: 5739-10548 bp Neighborhood of RT #1 [5739, 10553] beta_clamp RVT-GII COG4712 Feature: gene Location: 5739-6851 bp Feature: domain Description: beta_clamp Location: 5742-6846 bp Feature: domain Description: beta_clamp Location: 574 2-684 6 bp Feature: gene Location: 6932-7459 bp Feature: gene Location: 7537-9438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7855-8557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7855-8557 bp Feature: gene Location: 9580-9768 bp Feature: gene Location: 10197-10553 bp Feature: domain Description: COG4712 Location: 10206-10548 bp Feature: domain Description: COG4 712 Location: 10206-1054 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4712 (Uncharacterized protein ), beta_clamp (cl29549), RVT-GII