myRT

myRT report for GCA_001059875.1_ASM105987v1

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Seq: JUOI01000437.1 Bacillus cereus strain 910_BCER 1346_7920_188661, whole genome shotgun sequence (7920 bp)
Overview 1 RT 1: 812-6031 bp Neighborhood of RT #1 [812, 6031] RVT_N RVT-GII GIIM HNH DEXDc Feature: gene Location: 812-2623 bp Feature: RT Description: RVT_N Location: 866-1112 bp Feature: RT Description: RVT_N Location: 866-1 1 1 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1166-1820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 66-1 820 bp Feature: domain Description: GIIM Note: maturase Location: 1883-2117 bp Feature: domain Description: GIIM Note: maturase Location: 1 883-21 1 7 bp Feature: domain Description: HNH Note: nucleases Location: 2357-2492 bp Feature: domain Description: HNH Note: nucleases Location: 2357-2492 bp Feature: gene Location: 3195-5780 bp Feature: domain Description: DEXDc Location: 3972-4926 bp Feature: domain Description: DEXDc Location: 3972-4926 bp Feature: gene Location: 5840-6031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JUOI01000101.1 Bacillus cereus strain 910_BCER 306_16587_305601, whole genome shotgun sequence (16587 bp)
Overview 1 RT 1: 13015-16393 bp Neighborhood of RT #1 [13015, 16503] RVT-GII HNHc Feature: gene Location: 13015-13713 bp Feature: gene Location: 13730-14485 bp Feature: gene Location: 14605-16503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14929-15667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1492 9-15667 bp Feature: domain Description: HNHc Note: nucleases Location: 16246-16393 bp Feature: domain Description: HNHc Note: nucleases Location: 162 46-16393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JUOI01000218.1 Bacillus cereus strain 910_BCER 668_24747_512661, whole genome shotgun sequence (24747 bp)
Overview 1 RT 1: 13077-22013 bp Neighborhood of RT #1 [13077, 22192] TraG-D_C Ftsk_gamma Ftsk_gamma RVT_N RVT-GII GIIM nuc_hydro rpsA Feature: gene Location: 13077-13547 bp Feature: gene Location: 13565-17065 bp Feature: domain Description: TraG-D_C Location: 15182-15542 bp Feature: domain Description: TraG-D_C Location: 15182-15542 bp Feature: domain Description: Ftsk_gamma Location: 15950-16127 bp Feature: domain Description: Ftsk_gamma Location: 15950-16127 bp Feature: domain Description: Ftsk_gamma Location: 16259-16394 bp Feature: domain Description: Ftsk_gamma Location: 16259-163 94 bp Feature: gene Location: 17278-18924 bp Feature: RT Description: RVT_N Location: 17320-17557 bp Feature: RT Description: RVT_N Location: 173 20-17557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17611-18271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17611-18271 bp Feature: domain Description: GIIM Note: maturase Location: 18340-18571 bp Feature: domain Description: GIIM Note: maturase Location: 183 40-18571 bp Feature: gene Location: 19644-20615 bp Feature: domain Description: nuc_hydro Location: 19680-20586 bp Feature: domain Description: nuc_hydro Location: 19680-20586 bp Feature: gene Location: 21209-22192 bp Feature: domain Description: rpsA Location: 21476-22013 bp Feature: domain Description: rpsA Location: 21476-22013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), rpsA (TIGR00717)

Seq: JUOI01000029.1 Bacillus cereus strain 910_BCER 92_11083_228519, whole genome shotgun sequence (11083 bp)
Overview 1 RT 1: 5739-10548 bp Neighborhood of RT #1 [5739, 10553] beta_clamp RVT-GII COG4712 Feature: gene Location: 5739-6851 bp Feature: domain Description: beta_clamp Location: 5742-6846 bp Feature: domain Description: beta_clamp Location: 574 2-684 6 bp Feature: gene Location: 6932-7459 bp Feature: gene Location: 7537-9438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7855-8557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7855-8557 bp Feature: gene Location: 9580-9768 bp Feature: gene Location: 10197-10553 bp Feature: domain Description: COG4712 Location: 10206-10548 bp Feature: domain Description: COG4 712 Location: 10206-1054 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4712 (Uncharacterized protein ), beta_clamp (cl29549), RVT-GII

Seq: JUOI01000322.1 Bacillus cereus strain 910_BCER 981_21520_554603, whole genome shotgun sequence (21520 bp)
Overview 1 RT 1: 5226-13938 bp Neighborhood of RT #1 [5226, 14015] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 5226-9206 bp Feature: gene Location: 9237-10205 bp Feature: domain Description: TraC-F-type Location: 9264-10044 bp Feature: domain Description: TraC-F-type Location: 9264-10044 bp Feature: gene Location: 10496-12328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10796-11501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10796-115 01 bp Feature: domain Description: HNHc Note: nucleases Location: 12080-12212 bp Feature: domain Description: HNHc Note: nucleases Location: 12080-12212 bp Feature: gene Location: 12612-12770 bp Feature: gene Location: 13044-14015 bp Feature: domain Description: TraC-F-type Location: 13464-13938 bp Feature: domain Description: TraC-F-type Location: 13464-13938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746)