myRT

myRT report for GCA_001059965.1_ASM105996v1

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Seq: JULR01000212.1 Enterococcus faecium strain 967_EFCM 1143_3682_328004_346_,491+, whole genome shotgun sequence (3682 bp)
Overview 1 RT 1: 2-3622 bp Neighborhood of RT #1 [2, 3654] Tra8 RVT-AbiP2 HsdM Feature: gene Location: 2-385 bp Feature: domain Description: Tra8 Location: 14-365 bp Feature: domain Description: Tra8 Location: 1 4-365 bp Feature: gene Location: 363-1838 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 711-1176 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 71 1 -1 1 76 bp Feature: gene Location: 2176-3654 bp Feature: domain Description: HsdM Location: 2197-3622 bp Feature: domain Description: HsdM Location: 21 97-3622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286)

Seq: JULR01000260.1 Enterococcus faecium strain 967_EFCM 1193_21767_617640_936+,183_,487+, whole genome shotgun sequence (21767 bp)
Overview 1 RT 1: 17062-21765 bp Neighborhood of RT #1 [17062, 21764] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 17062-17406 bp Feature: domain Description: RelB_DinJ Location: 17272-17398 bp Feature: domain Description: RelB_DinJ Location: 172 72 -17398 bp Feature: gene Location: 17475-18491 bp Feature: domain Description: FtsK_SpoIIIE Location: 18132-18372 bp Feature: domain Description: FtsK_SpoIIIE Location: 18132 -18372 bp Feature: gene Location: 19085-20959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19451-20147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19451-2 0147 bp Feature: domain Description: HNHc Note: nucleases Location: 20687-20846 bp Feature: domain Description: HNHc Note: nucleases Location: 2 0687-2 0846 bp Feature: gene Location: 21061-21441 bp Feature: domain Description: FtsK Location: 21076-21316 bp Feature: domain Description: FtsK Location: 2 1076-2 1316 bp Feature: gene Location: 21486-21764 bp Feature: domain Description: Dcm Location: 21489-21765 bp Feature: domain Description: Dcm Location: 2 1489-2 1765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: JULR01000126.1 Enterococcus faecium strain 967_EFCM 815_8825_247365, whole genome shotgun sequence (8825 bp)
Overview 1 RT 1: 48-5378 bp Neighborhood of RT #1 [48, 5449] AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 48-866 bp Feature: domain Description: AAA_10 Location: 54-852 bp Feature: domain Description: AAA_10 Location: 54-852 bp Feature: gene Location: 1000-2784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1258-1957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1258-1957 bp Feature: gene Location: 3523-5073 bp Feature: domain Description: AAA_10 Location: 4852-5035 bp Feature: domain Description: AAA_10 Location: 4852-503 5 bp Feature: gene Location: 5060-5449 bp Feature: domain Description: TcpE Location: 5078-5378 bp Feature: domain Description: TcpE Location: 5078-53 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)