myRT

myRT report for GCA_001059995.1_ASM105999v1

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Seq: JULP01000176.1 Enterococcus faecium strain 969_EFCM 1052_8743_557789_132+,...,429_, whole genome shotgun sequence (8743 bp)
Overview 1 RT 1: 745-5808 bp Neighborhood of RT #1 [745, 5808] RVT-GII AAA_10 Feature: gene Location: 745-2571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 045-1 744 bp Feature: gene Location: 2705-3622 bp Feature: domain Description: AAA_10 Location: 2711-3590 bp Feature: domain Description: AAA_1 0 Location: 271 1 -3590 bp Feature: gene Location: 3625-5808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AAA_10 (pfam12846)

Seq: JULP01000211.1 Enterococcus faecium strain 969_EFCM 1087_4018_560430_340_,664+,1033_, whole genome shotgun sequence (4018 bp)
Overview 1 RT 1: 2-3986 bp Neighborhood of RT #1 [2, 4015] Tra8 RVT-AbiP2 HsdM Rve Feature: gene Location: 2-385 bp Feature: domain Description: Tra8 Location: 14-365 bp Feature: domain Description: Tra8 Location: 14-365 bp Feature: gene Location: 363-1838 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 711-1176 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 711-1176 bp Feature: gene Location: 2176-3654 bp Feature: domain Description: HsdM Location: 2197-3622 bp Feature: domain Description: HsdM Location: 2 197-362 2 bp Feature: gene Location: 3677-4015 bp Feature: domain Description: Rve Location: 3680-3986 bp Feature: domain Description: Rve Location: 3680-3986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: JULP01000218.1 Enterococcus faecium strain 969_EFCM 1094_15903_774616_368+,132+, whole genome shotgun sequence (15903 bp)
Overview 1 RT 1: 11274-14965 bp Neighborhood of RT #1 [11274, 15792] TcpE AAA_10 RVT-GII Feature: gene Location: 11274-11732 bp Feature: domain Description: TcpE Location: 11355-11652 bp Feature: domain Description: TcpE Location: 113 55-11652 bp Feature: gene Location: 11716-13269 bp Feature: domain Description: AAA_10 Location: 13048-13234 bp Feature: domain Description: AAA_10 Location: 13 048-13 23 4 bp Feature: gene Location: 14008-15792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14266-14965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14266-14965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII

Seq: JULP01000232.1 Enterococcus faecium strain 969_EFCM 1108_4392_381234_508+,989+, whole genome shotgun sequence (4392 bp)
Overview 1 RT 1: 919-3553 bp Neighborhood of RT #1 [919, 3672] ArdA RVT-GII HNHc Feature: gene Location: 919-1422 bp Feature: domain Description: ArdA Location: 937-1408 bp Feature: domain Description: ArdA Location: 937-14 08 bp Feature: gene Location: 1434-1595 bp Feature: gene Location: 1762-3672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2095-2833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2095-2833 bp Feature: domain Description: HNHc Note: nucleases Location: 3388-3553 bp Feature: domain Description: HNHc Note: nucleases Location: 3388-3553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507)

Seq: JULP01000238.1 Enterococcus faecium strain 969_EFCM 1114_14088_484658_624+,873+,102+, whole genome shotgun sequence (14088 bp)
Overview 1 RT 1: 375-7562 bp Neighborhood of RT #1 [375, 7562] RVT-GII HNHc AAA_10 Feature: gene Location: 375-1634 bp Feature: gene Location: 1637-1786 bp Feature: gene Location: 2312-4114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2609-3308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2609-3308 bp Feature: domain Description: HNHc Note: nucleases Location: 3863-4001 bp Feature: domain Description: HNHc Note: nucleases Location: 3863-4001 bp Feature: gene Location: 4154-5434 bp Feature: domain Description: AAA_10 Location: 4316-5399 bp Feature: domain Description: AAA_10 Location: 4316-5 399 bp Feature: gene Location: 5439-7562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), AAA_10 (pfam12846)

Seq: JULP01000267.1 Enterococcus faecium strain 969_EFCM 1143_10620_590520_989+,244+, whole genome shotgun sequence (10620 bp)
Overview 1 RT 1: 131-10498 bp Neighborhood of RT #1 [131, 10617] RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Zeta_toxin FtsK RVT-GII HNHc FtsK_SpoIIIE Feature: gene Location: 131-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46 4-1202 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: gene Location: 2874-4058 bp Feature: domain Description: HTH_XRE Location: 2904-3048 bp Feature: domain Description: HTH_XRE Location: 2904-3048 bp Feature: domain Description: Rol_Rep_N Location: 3081-3345 bp Feature: domain Description: Rol_Rep_N Location: 3081-3345 bp Feature: domain Description: Rep_trans Location: 3369-3981 bp Feature: domain Description: Rep_trans Location: 336 9-3981 bp Feature: gene Location: 4316-4606 bp Feature: gene Location: 6407-6646 bp Feature: domain Description: Zeta_toxin Location: 6506-6635 bp Feature: domain Description: Zeta_toxin Location: 6 506 -6 6 35 bp Feature: gene Location: 6741-7085 bp Feature: domain Description: FtsK Location: 6753-6993 bp Feature: domain Description: FtsK Location: 6 753-6 993 bp Feature: gene Location: 7187-9061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7553-8249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7553-8249 bp Feature: domain Description: HNHc Note: nucleases Location: 8789-8948 bp Feature: domain Description: HNHc Note: nucleases Location: 8789-8948 bp Feature: gene Location: 9655-10617 bp Feature: domain Description: FtsK_SpoIIIE Location: 10252-10498 bp Feature: domain Description: FtsK_SpoIIIE Location: 10252-10498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), Zeta_toxin (pfam06414), FtsK (COG1674), FtsK_SpoIIIE (pfam01580)

Seq: JULP01000268.1 Enterococcus faecium strain 969_EFCM 1144_8223_740785_989_,909+,132+, whole genome shotgun sequence (8223 bp)
Overview 1 RT 1: 721-7285 bp Neighborhood of RT #1 [721, 8112] RVT-GII HNHc ArdA AAA_10 RVT-GII Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-17 92 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2347 -2512 bp Feature: gene Location: 2792-2959 bp Feature: gene Location: 3076-3573 bp Feature: domain Description: ArdA Location: 3094-3559 bp Feature: domain Description: ArdA Location: 3094-3559 bp Feature: gene Location: 3985-5589 bp Feature: domain Description: AAA_10 Location: 5368-5554 bp Feature: domain Description: AAA_10 Location: 5368-5554 bp Feature: gene Location: 6286-8112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6586-7285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6586-7 285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), ArdA (pfam07275), AAA_10 (pfam12846)