myRT

myRT report for GCA_001060275.1_ASM106027v1

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Seq: JWDA01000036.1 Klebsiella pneumoniae strain 1098_KPNE 179_8849_152758, whole genome shotgun sequence (8849 bp)
Overview 1 RT 1: 938-5059 bp Neighborhood of RT #1 [938, 5059] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 938-1588 bp Feature: domain Description: TIGR02646 Location: 1004-1403 bp Feature: domain Description: TIGR02646 Location: 1 004-1 403 bp Feature: gene Location: 1591-3243 bp Feature: domain Description: COG3950 Location: 1789-3199 bp Feature: domain Description: COG3950 Location: 1 789-31 99 bp Feature: gene Location: 3240-4175 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3342-3942 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3342-3942 bp Feature: gene Location: 4190-4324 bp Feature: gene Location: 4598-5059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: JWDA01000021.1 Klebsiella pneumoniae strain 1098_KPNE 92_138800_2242458, whole genome shotgun sequence (138800 bp)
Overview 1 RT 1: 555-7405 bp Neighborhood of RT #1 [555, 7425] INT_P4_C RVT-UG4 FimD FimC Feature: gene Location: 555-1220 bp Feature: domain Description: INT_P4_C Location: 660-1218 bp Feature: domain Description: INT_P4_C Location: 660-12 18 bp Feature: gene Location: 1751-1939 bp Feature: gene Location: 1978-4056 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2386-2830 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 386-2 830 bp Feature: gene Location: 4056-6665 bp Feature: domain Description: FimD Location: 4113-6654 bp Feature: domain Description: FimD Location: 4113-6654 bp Feature: gene Location: 6697-7425 bp Feature: domain Description: FimC Location: 6730-7405 bp Feature: domain Description: FimC Location: 6730-7405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-UG4, FimD (COG3188), FimC (COG3121)