myRT

myRT report for GCA_001061295.1_ASM106129v1

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Seq: JVYE01000347.1 Shigella boydii strain 1221_SBOY 1620_3506_145787_904_,1437+,1531_, whole genome shotgun sequence (3506 bp)
Overview 1 RT 1: 1-3446 bp Neighborhood of RT #1 [1, 3469] PHA02517 RVT-GII GIIM PHA02517 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 1-372 bp Feature: domain Description: PHA02517 Location: 4-373 bp Feature: domain Description: PHA0251 7 Location: 4-373 bp Feature: gene Location: 489-2012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1 494 bp Feature: domain Description: GIIM Note: maturase Location: 1569-1767 bp Feature: domain Description: GIIM Note: maturase Location: 1 569-1 767 bp Feature: gene Location: 2604-2816 bp Feature: domain Description: PHA02517 Location: 2607-2751 bp Feature: domain Description: PHA0251 7 Location: 2607-2751 bp Feature: gene Location: 3038-3469 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3044-3314 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3044-331 4 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3335-3446 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3335-3446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388)

Seq: JVYE01000357.1 Shigella boydii strain 1221_SBOY 1630_20405_533136_1163_,...,244+, whole genome shotgun sequence (20405 bp)
Overview 1 RT 1: 1680-5569 bp Neighborhood of RT #1 [1680, 5574] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 1680-1994 bp Feature: gene Location: 2392-2589 bp Feature: gene Location: 2758-3192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2950-3166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 950-3166 bp Feature: gene Location: 3165-3818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3168-3576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3168-3576 bp Feature: domain Description: GIIM Note: maturase Location: 3624-3816 bp Feature: domain Description: GIIM Note: maturase Location: 362 4-3816 bp Feature: gene Location: 4194-4412 bp Feature: gene Location: 4543-5574 bp Feature: domain Description: LacI Location: 4585-4720 bp Feature: domain Description: LacI Location: 4585-472 0 bp Feature: domain Description: PBP1_GntR Location: 4759-5569 bp Feature: domain Description: PBP1_GntR Location: 4759-5569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)