myRT

myRT report for GCA_001063865.1_ASM106386v1

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Seq: JUZD01000263.1 Pseudomonas aeruginosa strain 637_PAER 423_38879_483193, whole genome shotgun sequence (38879 bp)
Overview 1 RT 1: 163-8624 bp Neighborhood of RT #1 [163, 8626] RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 163-1848 bp Feature: RT Description: RVT_N Location: 220-460 bp Feature: RT Description: RVT_N Location: 220-460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 508-1144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 508-1 1 44 bp Feature: domain Description: GIIM Note: maturase Location: 1198-1429 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 98-1 429 bp Feature: domain Description: HNH Note: nucleases Location: 1681-1819 bp Feature: domain Description: HNH Note: nucleases Location: 1 681 -1 81 9 bp Feature: gene Location: 2929-6666 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3037-3694 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3037-3694 bp Feature: domain Description: PRK09776 Location: 3907-4378 bp Feature: domain Description: PRK09776 Location: 3907-4378 bp Feature: domain Description: PAS Location: 4423-4960 bp Feature: domain Description: PAS Location: 4423-4960 bp Feature: domain Description: PRK10060 Location: 4969-6616 bp Feature: domain Description: PRK1 0060 Location: 4969-661 6 bp Feature: gene Location: 6773-8626 bp Feature: domain Description: PRK05658 Location: 6785-8624 bp Feature: domain Description: PRK05658 Location: 6785-8624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)