myRT

myRT report for GCA_001063935.1_ASM106393v1

Download annotations/find similar RTs

Seq: JVQU01000056.1 Klebsiella pneumoniae strain 187_KPNE 383_58264_1197070, whole genome shotgun sequence (58264 bp)
Overview 1 RT 1: 45909-51270 bp Neighborhood of RT #1 [45909, 51335] InsE RVT-UG8 INT_P4_C PRK09692 Feature: gene Location: 45909-46097 bp Feature: gene Location: 46120-46422 bp Feature: domain Description: InsE Location: 46132-46372 bp Feature: domain Description: InsE Location: 461 32-46372 bp Feature: gene Location: 46952-48952 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 47456-47900 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 47456-47900 bp Feature: gene Location: 50219-50644 bp Feature: domain Description: INT_P4_C Location: 50222-50642 bp Feature: domain Description: INT_P4_C Location: 50222-50642 bp Feature: gene Location: 50796-51335 bp Feature: domain Description: PRK09692 Location: 50802-51270 bp Feature: domain Description: PRK09692 Location: 50802-51 270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-UG8, INT_P4_C (cd00801), PRK09692 (Integrase; provisional)

Seq: JVQU01000064.1 Klebsiella pneumoniae strain 187_KPNE 432_155251_3294041, whole genome shotgun sequence (155251 bp)
Overview 1 RT 1: 612-7465 bp Neighborhood of RT #1 [612, 7482] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 612-1277 bp Feature: domain Description: INT_P4_C Location: 717-1275 bp Feature: domain Description: INT_P4_C Location: 717-12 75 bp Feature: gene Location: 1538-1978 bp Feature: domain Description: Integrase_1 Location: 1544-1760 bp Feature: domain Description: Integrase_1 Location: 1544-1760 bp Feature: gene Location: 2035-4113 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2443-2887 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 443-2 887 bp Feature: gene Location: 4113-6722 bp Feature: domain Description: FimD Location: 4170-6711 bp Feature: domain Description: FimD Location: 4170-6711 bp Feature: gene Location: 6754-7482 bp Feature: domain Description: FimC Location: 6787-7465 bp Feature: domain Description: FimC Location: 6787-7465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)