myRT

myRT report for GCA_001065035.1_ASM106503v1

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Seq: JVGC01000067.1 Pseudomonas aeruginosa strain 462_PAER 1285_82269_1437765_702_,...,459_, whole genome shotgun sequence (82269 bp)
Overview 1 RT 1: 184-10876 bp Neighborhood of RT #1 [184, 10878] INT_Rci_Hp1_C RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 184-942 bp Feature: gene Location: 1019-2113 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1529-2030 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 529-2030 bp Feature: gene Location: 2415-4100 bp Feature: RT Description: RVT_N Location: 2472-2712 bp Feature: RT Description: RVT_N Location: 2472-271 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2760-3396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2760-3396 bp Feature: domain Description: GIIM Note: maturase Location: 3450-3681 bp Feature: domain Description: GIIM Note: maturase Location: 3450-3681 bp Feature: domain Description: HNH Note: nucleases Location: 3933-4071 bp Feature: domain Description: HNH Note: nucleases Location: 3933-4071 bp Feature: gene Location: 5181-8918 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 5289-5946 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 5289-5946 bp Feature: domain Description: PRK09776 Location: 6159-6630 bp Feature: domain Description: PRK09776 Location: 61 59-6630 bp Feature: domain Description: PAS Location: 6675-7212 bp Feature: domain Description: PAS Location: 6675-721 2 bp Feature: domain Description: PRK10060 Location: 7221-8868 bp Feature: domain Description: PRK1 0060 Location: 7221 -8868 bp Feature: gene Location: 9025-10878 bp Feature: domain Description: PRK05658 Location: 9037-10876 bp Feature: domain Description: PRK05658 Location: 9037-1 0876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)