myRT

myRT report for GCA_001065075.1_ASM106507v1

Download annotations/find similar RTs

Seq: JVFW01000223.1 Pseudomonas aeruginosa strain 468_PAER 964_80034_1607363_265+,...,689_, whole genome shotgun sequence (80034 bp)
Overview 1 RT 1: 71399-79833 bp Neighborhood of RT #1 [71399, 79862] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH Feature: gene Location: 71399-73252 bp Feature: domain Description: PRK05658 Location: 71411-73250 bp Feature: domain Description: PRK05658 Location: 71 41 1 -73250 bp Feature: gene Location: 73359-77096 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73467-74124 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73467-741 24 bp Feature: domain Description: PRK09776 Location: 74337-74808 bp Feature: domain Description: PRK09776 Location: 74337-74808 bp Feature: domain Description: PAS Location: 74853-75390 bp Feature: domain Description: PAS Location: 74853-75390 bp Feature: domain Description: PRK10060 Location: 75399-77046 bp Feature: domain Description: PRK1 0060 Location: 75399-77046 bp Feature: gene Location: 78177-79862 bp Feature: RT Description: RVT_N Location: 78234-78474 bp Feature: RT Description: RVT_N Location: 78234-78474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78522-79158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78522-791 58 bp Feature: domain Description: GIIM Note: maturase Location: 79212-79443 bp Feature: domain Description: GIIM Note: maturase Location: 7921 2-79443 bp Feature: domain Description: HNH Note: nucleases Location: 79695-79833 bp Feature: domain Description: HNH Note: nucleases Location: 79695-79833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)