myRT

myRT report for GCA_001065715.1_ASM106571v1

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Seq: JUZH01000603.1 Klebsiella oxytoca strain 633_KOXY 1987_19217_248606_459+,...,977_, whole genome shotgun sequence (19217 bp)
Overview 1 RT 1: 14213-19064 bp Neighborhood of RT #1 [14213, 19066] TIGR02646 COG3950 RVT-Retrons PRK09692 Feature: gene Location: 14213-14845 bp Feature: domain Description: TIGR02646 Location: 14303-14528 bp Feature: domain Description: TIGR02646 Location: 1 4303-1 4528 bp Feature: gene Location: 14842-16428 bp Feature: domain Description: COG3950 Location: 15022-16237 bp Feature: domain Description: COG3950 Location: 1 5022-1 6237 bp Feature: gene Location: 16409-17392 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16538-17135 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6538-1 71 35 bp Feature: gene Location: 17399-17554 bp Feature: gene Location: 17825-19066 bp Feature: domain Description: PRK09692 Location: 17828-19064 bp Feature: domain Description: PRK09692 Location: 1 7828-1 9064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK09692 (Integrase; provisional)

Seq: JUZH01000131.1 Klebsiella oxytoca strain 633_KOXY 467_29165_435805, whole genome shotgun sequence (29165 bp)
Overview 1 RT 1: 9100-12836 bp Neighborhood of RT #1 [9100, 12844] PHA02517 COG3547 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 9100-9306 bp Feature: domain Description: PHA02517 Location: 9103-9295 bp Feature: domain Description: PHA02 517 Location: 9103-92 95 bp Feature: gene Location: 9425-10501 bp Feature: domain Description: COG3547 Location: 9464-10388 bp Feature: domain Description: COG3547 Location: 9464-10388 bp Feature: gene Location: 11043-11798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11151-11280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11151-112 80 bp Feature: domain Description: GIIM Note: maturase Location: 11394-11574 bp Feature: domain Description: GIIM Note: maturase Location: 11394-11574 bp Feature: gene Location: 12099-12509 bp Feature: domain Description: PHA02517 Location: 12105-12444 bp Feature: domain Description: PHA02 517 Location: 12 105-12 444 bp Feature: gene Location: 12566-12844 bp Feature: domain Description: InsE Location: 12578-12836 bp Feature: domain Description: InsE Location: 12 578-12 836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963)