myRT

myRT report for GCA_001065755.1_ASM106575v1

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Seq: JUZF01000197.1 Pseudomonas aeruginosa strain 635_PAER 318_14771_176723, whole genome shotgun sequence (14771 bp)
Overview 1 RT 1: 169-8630 bp Neighborhood of RT #1 [169, 8632] RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 169-1854 bp Feature: RT Description: RVT_N Location: 226-466 bp Feature: RT Description: RVT_N Location: 226-466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514-1150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 4-1 1 50 bp Feature: domain Description: GIIM Note: maturase Location: 1204-1435 bp Feature: domain Description: GIIM Note: maturase Location: 1 204-1 435 bp Feature: domain Description: HNH Note: nucleases Location: 1687-1825 bp Feature: domain Description: HNH Note: nucleases Location: 1 687-1 825 bp Feature: gene Location: 2935-6672 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3043-3700 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3043-3700 bp Feature: domain Description: PRK09776 Location: 3913-4384 bp Feature: domain Description: PRK09776 Location: 391 3-4384 bp Feature: domain Description: PAS Location: 4429-4966 bp Feature: domain Description: PAS Location: 4429-4966 bp Feature: domain Description: PRK10060 Location: 4975-6622 bp Feature: domain Description: PRK1 0060 Location: 4975-6622 bp Feature: gene Location: 6779-8632 bp Feature: domain Description: PRK05658 Location: 6791-8630 bp Feature: domain Description: PRK05658 Location: 6791 -8630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)