myRT

myRT report for GCA_001067695.1_ASM106769v1

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Seq: JUNE01000314.1 Shigella dysenteriae strain 93_SDYS 1209_24045_284682, whole genome shotgun sequence (24045 bp)
Overview 1 RT 1: 7808-12004 bp Neighborhood of RT #1 [7808, 12009] RVT-Retrons InsE Feature: gene Location: 7808-8179 bp Feature: gene Location: 8396-9691 bp Feature: gene Location: 9880-11043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10105-10780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 05-1 0780 bp Feature: gene Location: 11190-11615 bp Feature: gene Location: 11710-12009 bp Feature: domain Description: InsE Location: 11740-12004 bp Feature: domain Description: InsE Location: 1 1 740-1 2004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, InsE (COG2963)

Seq: JUNE01000618.1 Shigella dysenteriae strain 93_SDYS 2397_32656_470991, whole genome shotgun sequence (32656 bp)
Overview 1 RT 1: 25652-31561 bp Neighborhood of RT #1 [25652, 31561] DUF4062 RVT-AbiP2 HTH_36 Feature: gene Location: 25652-26233 bp Feature: gene Location: 26271-27608 bp Feature: domain Description: DUF4062 Location: 26304-26547 bp Feature: domain Description: DUF4062 Location: 2 6304-2 6547 bp Feature: gene Location: 28009-29508 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 28441-28897 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 8441-2 8897 bp Feature: gene Location: 29716-30225 bp Feature: domain Description: HTH_36 Location: 29902-30058 bp Feature: domain Description: HTH_36 Location: 2 9902 -30058 bp Feature: gene Location: 31136-31561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4062 (pfam13271), RVT-AbiP2, HTH_36 (pfam13730)

Seq: JUNE01000239.1 Shigella dysenteriae strain 93_SDYS 903_52839_754213, whole genome shotgun sequence (52839 bp)
Overview 1 RT 1: 12066-17043 bp Neighborhood of RT #1 [12066, 17043] RVT-UG16 PRK13889 Feature: gene Location: 12066-12320 bp Feature: gene Location: 12265-12786 bp Feature: gene Location: 12915-14399 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 13278-13686 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 13 278-13 686 bp Feature: gene Location: 14537-16030 bp Feature: domain Description: PRK13889 Location: 14540-15140 bp Feature: domain Description: PRK13 889 Location: 14540-15140 bp Feature: gene Location: 16678-17043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG16, PRK13889 (conjugal transfer relaxase TraA; Provisional)