myRT

myRT report for GCA_001067965.1_ASM106796v1

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Seq: JUMA01000056.1 Pseudomonas aeruginosa strain 958_PAER 148_93024_1780808, whole genome shotgun sequence (93024 bp)
Overview 1 RT 1: 26083-36380 bp Neighborhood of RT #1 [26083, 36391] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 26083-27936 bp Feature: domain Description: PRK05658 Location: 26095-27934 bp Feature: domain Description: PRK05658 Location: 26095-27934 bp Feature: gene Location: 28043-31780 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 28151-28808 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 281 51 -28808 bp Feature: domain Description: PRK09776 Location: 29021-29492 bp Feature: domain Description: PRK09776 Location: 29021 -29492 bp Feature: domain Description: PAS Location: 29549-30074 bp Feature: domain Description: PAS Location: 29549-30074 bp Feature: domain Description: PRK10060 Location: 30083-31730 bp Feature: domain Description: PRK1 0060 Location: 30083-31 730 bp Feature: gene Location: 32861-34546 bp Feature: RT Description: RVT_N Location: 32918-33158 bp Feature: RT Description: RVT_N Location: 3291 8-331 58 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33206-33842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33206-33842 bp Feature: domain Description: GIIM Note: maturase Location: 33896-34127 bp Feature: domain Description: GIIM Note: maturase Location: 33896-341 27 bp Feature: domain Description: HNH Note: nucleases Location: 34379-34517 bp Feature: domain Description: HNH Note: nucleases Location: 34379-3451 7 bp Feature: gene Location: 34874-35011 bp Feature: gene Location: 35270-36391 bp Feature: domain Description: COG3177 Location: 35288-36380 bp Feature: domain Description: COG31 77 Location: 35288-36380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )

Seq: JUMA01000198.1 Pseudomonas aeruginosa strain 958_PAER 487_1861_68727, whole genome shotgun sequence (1861 bp)
Overview 1 RT 1: 65-1860 bp Neighborhood of RT #1 [65, 1860] RVT-GII GIIM Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 78-935 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1013-12 35 bp Feature: gene Location: 1684-1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)