myRT

myRT report for GCA_001068395.1_ASM106839v1

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Seq: JUKP01000192.1 Pseudomonas aeruginosa strain 993_PAER 523_76159_1417379, whole genome shotgun sequence (76159 bp)
Overview 1 RT 1: 9228-19525 bp Neighborhood of RT #1 [9228, 19536] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 9228-11081 bp Feature: domain Description: PRK05658 Location: 9240-11079 bp Feature: domain Description: PRK05658 Location: 9240-1 1 079 bp Feature: gene Location: 11188-14925 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 11296-11953 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 1 1 296-1 1 953 bp Feature: domain Description: PRK09776 Location: 12166-12637 bp Feature: domain Description: PRK09776 Location: 1 21 66-1 2637 bp Feature: domain Description: PAS Location: 12694-13219 bp Feature: domain Description: PAS Location: 1 2694-1 321 9 bp Feature: domain Description: PRK10060 Location: 13228-14875 bp Feature: domain Description: PRK1 0060 Location: 1 3228-1 4875 bp Feature: gene Location: 16006-17691 bp Feature: RT Description: RVT_N Location: 16063-16303 bp Feature: RT Description: RVT_N Location: 1 6063-1 6303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16351-16987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6351 -1 6987 bp Feature: domain Description: GIIM Note: maturase Location: 17041-17272 bp Feature: domain Description: GIIM Note: maturase Location: 1 7041 -1 7272 bp Feature: domain Description: HNH Note: nucleases Location: 17524-17662 bp Feature: domain Description: HNH Note: nucleases Location: 1 7524-1 7662 bp Feature: gene Location: 18019-18156 bp Feature: gene Location: 18415-19536 bp Feature: domain Description: COG3177 Location: 18433-19525 bp Feature: domain Description: COG31 77 Location: 1 8433-1 9525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein ), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: JUKP01000324.1 Pseudomonas aeruginosa strain 993_PAER 869_1861_71934, whole genome shotgun sequence (1861 bp)
Overview 1 RT 1: 2-1699 bp Neighborhood of RT #1 [2, 1797] RVT-GII GIIM Feature: gene Location: 2-178 bp Feature: gene Location: 529-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 -1399 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Feature: domain Description: GIIM Note: maturase Location: 1477-1699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)