myRT

myRT report for GCA_001070955.1_ASM107095v1

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Seq: JVJO01000479.1 Klebsiella michiganensis strain 375_KOXY 1769_10415_365000_183_,...,1195+, whole genome shotgun sequence (10428 bp)
Overview 1 RT 1: 6631-10425 bp Neighborhood of RT #1 [6631, 10425] COG3547 RVT-GII GIIM Feature: gene Location: 6631-7707 bp Feature: domain Description: COG3547 Location: 6670-7591 bp Feature: domain Description: COG3547 Location: 6670-7591 bp Feature: gene Location: 7956-8162 bp Feature: gene Location: 8249-9772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8522-9254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8522-9254 bp Feature: domain Description: GIIM Note: maturase Location: 9329-9527 bp Feature: domain Description: GIIM Note: maturase Location: 9329-9527 bp Feature: gene Location: 10066-10425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: JVJO01000510.1 Klebsiella michiganensis strain 375_KOXY 1801_7699_178356_753+,...,1266+, whole genome shotgun sequence (7699 bp)
Overview 1 RT 1: 801-6276 bp Neighborhood of RT #1 [801, 6281] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 801-1472 bp Feature: domain Description: Plasmid_stab_B Location: 816-1023 bp Feature: domain Description: Plasmid_stab_B Location: 816-102 3 bp Feature: domain Description: Plasmid_stab_B Location: 1128-1335 bp Feature: domain Description: Plasmid_stab_B Location: 112 8-1335 bp Feature: gene Location: 1475-2446 bp Feature: domain Description: StbA Location: 1478-2423 bp Feature: domain Description: StbA Location: 1478-2 42 3 bp Feature: gene Location: 2695-4182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100-3790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100-3790 bp Feature: gene Location: 4336-5010 bp Feature: domain Description: PRK10276 Location: 4588-4996 bp Feature: domain Description: PRK102 76 Location: 4588-4996 bp Feature: gene Location: 5010-6281 bp Feature: domain Description: umuC Location: 5013-6276 bp Feature: domain Description: umuC Location: 5013-62 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Plasmid_stab_B (pfam10784)

Seq: JVJO01000519.1 Klebsiella michiganensis strain 375_KOXY 1812_3778_207495_900+,1195_, whole genome shotgun sequence (3778 bp)
Overview 1 RT 1: 819-3443 bp Neighborhood of RT #1 [819, 3688] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 819-1121 bp Feature: domain Description: InsE Location: 828-1110 bp Feature: domain Description: InsE Location: 828-1110 bp Feature: gene Location: 1148-1573 bp Feature: domain Description: PHA02517 Location: 1172-1508 bp Feature: domain Description: PHA02517 Location: 1172-1508 bp Feature: gene Location: 2165-3688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2438-3170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243 8-3 170 bp Feature: domain Description: GIIM Note: maturase Location: 3245-3443 bp Feature: domain Description: GIIM Note: maturase Location: 3 245-3 443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: JVJO01000541.1 Klebsiella michiganensis strain 375_KOXY 1834_118110_1611092_1195+,...,488+, whole genome shotgun sequence (118110 bp)
Overview 1 RT 1: 91-3686 bp Neighborhood of RT #1 [91, 3970] RVT-GII GIIM FimC Feature: gene Location: 91-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364 -1096 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: gene Location: 2245-3297 bp Feature: gene Location: 3308-3970 bp Feature: domain Description: FimC Location: 3314-3686 bp Feature: domain Description: FimC Location: 3314 -3686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), RVT-GII, GIIM (pfam08388)

Seq: JVJO01000542.1 Klebsiella michiganensis strain 375_KOXY 1835_18379_822547_1195+,...,630_, whole genome shotgun sequence (18379 bp)
Overview 1 RT 1: 91-3082 bp Neighborhood of RT #1 [91, 3090] RVT-GII GIIM PRK13754 Feature: gene Location: 91-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: gene Location: 2235-2477 bp Feature: gene Location: 2497-3090 bp Feature: domain Description: PRK13754 Location: 2500-3082 bp Feature: domain Description: PRK1375 4 Location: 25 00-3082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13754 (fertility inhibition protein FinO), RVT-GII, GIIM (pfam08388)

Seq: JVJO01000603.1 Klebsiella michiganensis strain 375_KOXY 1897_29336_1251684_753+,...,1195+, whole genome shotgun sequence (29336 bp)
Overview 1 RT 1: 25637-29333 bp Neighborhood of RT #1 [25637, 29333] RVT-GII GIIM Feature: gene Location: 25637-26260 bp Feature: gene Location: 26454-26720 bp Feature: gene Location: 27157-28680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27430-28162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27430-2816 2 bp Feature: domain Description: GIIM Note: maturase Location: 28237-28435 bp Feature: domain Description: GIIM Note: maturase Location: 28237-28435 bp Feature: gene Location: 28974-29333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)