myRT

myRT report for GCA_001072735.1_ASM107273v1

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Seq: JVIT01000126.1 Klebsiella michiganensis strain 397_KOXY 1612_18257_362628_681+,1003+, whole genome shotgun sequence (18257 bp)
Overview 1 RT 1: 12856-18254 bp Neighborhood of RT #1 [12856, 18254] TcfC CooC_C RVT-GII GIIM Feature: gene Location: 12856-15381 bp Feature: domain Description: TcfC Location: 13705-13906 bp Feature: domain Description: TcfC Location: 1 3705-1 3906 bp Feature: domain Description: CooC_C Location: 15052-15328 bp Feature: domain Description: CooC_C Location: 1 5052-1 5328 bp Feature: gene Location: 15371-15988 bp Feature: gene Location: 16078-17601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16351-17083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6351 -1 7083 bp Feature: domain Description: GIIM Note: maturase Location: 17158-17356 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 58-1 7356 bp Feature: gene Location: 17895-18254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcfC (pfam16967), CooC_C (pfam15976), RVT-GII, GIIM (pfam08388)

Seq: JVIT01000153.1 Klebsiella michiganensis strain 397_KOXY 1639_8092_373214_953+,...,1003+, whole genome shotgun sequence (8092 bp)
Overview 1 RT 1: 4393-8089 bp Neighborhood of RT #1 [4393, 8089] RVT-GII GIIM Feature: gene Location: 4393-5016 bp Feature: gene Location: 5210-5476 bp Feature: gene Location: 5913-7436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6186-6918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6186-6918 bp Feature: domain Description: GIIM Note: maturase Location: 6993-7191 bp Feature: domain Description: GIIM Note: maturase Location: 6993-7191 bp Feature: gene Location: 7730-8089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JVIT01000157.1 Klebsiella michiganensis strain 397_KOXY 1643_3778_196441_1003+,826+, whole genome shotgun sequence (3778 bp)
Overview 1 RT 1: 91-2538 bp Neighborhood of RT #1 [91, 2538] RVT-GII GIIM Feature: gene Location: 91-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 64-1096 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1171-13 69 bp Feature: gene Location: 1908-2345 bp Feature: gene Location: 2350-2538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JVIT01000158.1 Klebsiella michiganensis strain 397_KOXY 1644_29937_485096_1003+,...,546+, whole genome shotgun sequence (30004 bp)
Overview 1 RT 1: 91-3686 bp Neighborhood of RT #1 [91, 3970] RVT-GII GIIM FimC Feature: gene Location: 91-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364 -1096 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: gene Location: 2245-3297 bp Feature: gene Location: 3308-3970 bp Feature: domain Description: FimC Location: 3314-3686 bp Feature: domain Description: FimC Location: 3314 -3686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), RVT-GII, GIIM (pfam08388)

Seq: JVIT01000230.1 Klebsiella michiganensis strain 397_KOXY 1717_11335_499213_1480+,1178+,1003_, whole genome shotgun sequence (11335 bp)
Overview 1 RT 1: 8246-11000 bp Neighborhood of RT #1 [8246, 11245] PRK13754 RVT-GII GIIM Feature: gene Location: 8246-8839 bp Feature: domain Description: PRK13754 Location: 8249-8831 bp Feature: domain Description: PRK1375 4 Location: 8249-8831 bp Feature: gene Location: 8859-9101 bp Feature: gene Location: 9722-11245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9995-10727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9995 -10727 bp Feature: domain Description: GIIM Note: maturase Location: 10802-11000 bp Feature: domain Description: GIIM Note: maturase Location: 10802-11000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13754 (fertility inhibition protein FinO), RVT-GII, GIIM (pfam08388)

Seq: JVIT01000241.1 Klebsiella michiganensis strain 397_KOXY 1728_18299_552346_446_,...,1003+, whole genome shotgun sequence (18355 bp)
Overview 1 RT 1: 801-6276 bp 2 RT 2: 14558-18352 bp Neighborhood of RT #1 [801, 6281] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Neighborhood of RT #2 [14558, 18352] COG3547 RVT-GII GIIM Feature: gene Location: 801-1472 bp Feature: domain Description: Plasmid_stab_B Location: 816-1023 bp Feature: domain Description: Plasmid_stab_B Location: 816 -1023 bp Feature: domain Description: Plasmid_stab_B Location: 1128-1335 bp Feature: domain Description: Plasmid_stab_B Location: 1128-1335 bp Feature: gene Location: 1475-2446 bp Feature: domain Description: StbA Location: 1478-2423 bp Feature: domain Description: StbA Location: 1478-2423 bp Feature: gene Location: 2695-4182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100-3790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100-3790 bp Feature: gene Location: 4336-5010 bp Feature: domain Description: PRK10276 Location: 4588-4996 bp Feature: domain Description: PRK10276 Location: 4588-4996 bp Feature: gene Location: 5010-6281 bp Feature: domain Description: umuC Location: 5013-6276 bp Feature: domain Description: umuC Location: 5013-6 276 bp Feature: gene Location: 14558-15634 bp Feature: domain Description: COG3547 Location: 14597-15518 bp Feature: domain Description: COG3547 Location: 14597-15518 bp Feature: gene Location: 15883-16089 bp Feature: gene Location: 16176-17699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16449-17181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 449-17181 bp Feature: domain Description: GIIM Note: maturase Location: 17256-17454 bp Feature: domain Description: GIIM Note: maturase Location: 17256 -17454 bp Feature: gene Location: 17993-18352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Plasmid_stab_B (pfam10784), COG3547 (Transposase ), GIIM (pfam08388)