myRT

myRT report for GCA_001072835.1_ASM107283v1

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Seq: JVIH01000571.1 Klebsiella michiganensis strain 409_KOXY 2438_11335_568482_1410+,284+,2099_, whole genome shotgun sequence (11335 bp)
Overview 1 RT 1: 91-3082 bp Neighborhood of RT #1 [91, 3090] RVT-GII GIIM PRK13754 Feature: gene Location: 91-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1 096 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 71 -1 369 bp Feature: gene Location: 2235-2477 bp Feature: gene Location: 2497-3090 bp Feature: domain Description: PRK13754 Location: 2500-3082 bp Feature: domain Description: PRK1 3754 Location: 2500-3082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13754 (fertility inhibition protein FinO), RVT-GII, GIIM (pfam08388)

Seq: JVIH01000572.1 Klebsiella michiganensis strain 409_KOXY 2439_145406_1792817_1410+,...,1919_, whole genome shotgun sequence (145454 bp)
Overview 1 RT 1: 91-3686 bp Neighborhood of RT #1 [91, 3970] RVT-GII GIIM FimC Feature: gene Location: 91-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1096 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1369 bp Feature: gene Location: 2245-3297 bp Feature: gene Location: 3308-3970 bp Feature: domain Description: FimC Location: 3314-3686 bp Feature: domain Description: FimC Location: 3314-3686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), RVT-GII, GIIM (pfam08388)

Seq: JVIH01000573.1 Klebsiella michiganensis strain 409_KOXY 2440_9501_490509_1410_,...,2102+, whole genome shotgun sequence (9501 bp)
Overview 1 RT 1: 1-2883 bp Neighborhood of RT #1 [1, 2883] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Feature: gene Location: 2205-2411 bp Feature: gene Location: 2617-2883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JVIH01000574.1 Klebsiella michiganensis strain 409_KOXY 2441_26816_479748_1410_,869_,812+, whole genome shotgun sequence (26816 bp)
Overview 1 RT 1: 1-5349 bp Neighborhood of RT #1 [1, 5402] RVT-GII GIIM TcfC CooC_C Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: gene Location: 2270-2887 bp Feature: gene Location: 2877-5402 bp Feature: domain Description: TcfC Location: 3726-3927 bp Feature: domain Description: TcfC Location: 3726-3927 bp Feature: domain Description: CooC_C Location: 5073-5349 bp Feature: domain Description: CooC_C Location: 5073-534 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcfC (pfam16967), CooC_C (pfam15976), RVT-GII, GIIM (pfam08388)

Seq: JVIH01000579.1 Klebsiella michiganensis strain 409_KOXY 2447_3982_289055_1476+,...,1410_, whole genome shotgun sequence (3982 bp)
Overview 1 RT 1: 1023-3647 bp Neighborhood of RT #1 [1023, 3892] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 1023-1325 bp Feature: domain Description: InsE Location: 1032-1314 bp Feature: domain Description: InsE Location: 1032-1314 bp Feature: gene Location: 1352-1777 bp Feature: domain Description: PHA02517 Location: 1376-1712 bp Feature: domain Description: PHA025 17 Location: 1376-1712 bp Feature: gene Location: 2369-3892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2642-3374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2642-3374 bp Feature: domain Description: GIIM Note: maturase Location: 3449-3647 bp Feature: domain Description: GIIM Note: maturase Location: 3449-3647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JVIH01000683.1 Klebsiella michiganensis strain 409_KOXY 2556_18299_649313_891+,...,1410+, whole genome shotgun sequence (18355 bp)
Overview 1 RT 1: 801-6276 bp 2 RT 2: 14558-18352 bp Neighborhood of RT #1 [801, 6281] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Neighborhood of RT #2 [14558, 18352] COG3547 RVT-GII GIIM Feature: gene Location: 801-1472 bp Feature: domain Description: Plasmid_stab_B Location: 816-1023 bp Feature: domain Description: Plasmid_stab_B Location: 816 -1023 bp Feature: domain Description: Plasmid_stab_B Location: 1128-1335 bp Feature: domain Description: Plasmid_stab_B Location: 1128-1335 bp Feature: gene Location: 1475-2446 bp Feature: domain Description: StbA Location: 1478-2423 bp Feature: domain Description: StbA Location: 1478-2423 bp Feature: gene Location: 2695-4182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100-3790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100-3790 bp Feature: gene Location: 4336-5010 bp Feature: domain Description: PRK10276 Location: 4588-4996 bp Feature: domain Description: PRK10276 Location: 4588-4996 bp Feature: gene Location: 5010-6281 bp Feature: domain Description: umuC Location: 5013-6276 bp Feature: domain Description: umuC Location: 5013-6 276 bp Feature: gene Location: 14558-15634 bp Feature: domain Description: COG3547 Location: 14597-15518 bp Feature: domain Description: COG3547 Location: 14597-15518 bp Feature: gene Location: 15883-16089 bp Feature: gene Location: 16176-17699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16449-17181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 449-17181 bp Feature: domain Description: GIIM Note: maturase Location: 17256-17454 bp Feature: domain Description: GIIM Note: maturase Location: 17256 -17454 bp Feature: gene Location: 17993-18352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Plasmid_stab_B (pfam10784), COG3547 (Transposase ), GIIM (pfam08388)