myRT

myRT report for GCA_001076335.1_ASM107633v1

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Seq: JVWZ01000415.1 Enterococcus faecium strain 1250_EFCM 1821_3288_82621_722_,...,1691_, whole genome shotgun sequence (3288 bp)
Overview 1 RT 1: 721-3275 bp Neighborhood of RT #1 [721, 3286] RVT-GII HNHc ArdA Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 054-1 792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-251 2 bp Feature: gene Location: 2819-2959 bp Feature: gene Location: 2972-3286 bp Feature: domain Description: ArdA Location: 2990-3275 bp Feature: domain Description: ArdA Location: 2990-3275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: JVWZ01000424.1 Enterococcus faecium strain 1250_EFCM 1832_4315_1122778_432_,...,1727+, whole genome shotgun sequence (4310 bp)
Overview 1 RT 1: 2-3919 bp Neighborhood of RT #1 [2, 3951] Tra8 RVT-AbiP2 HsdM Feature: gene Location: 2-682 bp Feature: domain Description: Tra8 Location: 14-659 bp Feature: domain Description: Tra8 Location: 14-659 bp Feature: gene Location: 660-2135 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1008-1473 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1008-1473 bp Feature: gene Location: 2473-3951 bp Feature: domain Description: HsdM Location: 2494-3919 bp Feature: domain Description: HsdM Location: 2 494-3919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286)

Seq: JVWZ01000045.1 Enterococcus faecium strain 1250_EFCM 212_30527_332633, whole genome shotgun sequence (30527 bp)
Overview 1 RT 1: 23907-29768 bp Neighborhood of RT #1 [23907, 29779] PRK09362 RVT-GII GIIM Adenylsuccinate_lyase_1 PRK06019 Feature: gene Location: 23907-24635 bp Feature: domain Description: PRK09362 Location: 23910-24612 bp Feature: domain Description: PRK093 62 Location: 23 910-24612 bp Feature: gene Location: 24891-25268 bp Feature: gene Location: 25837-27225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26158-26773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26158-26773 bp Feature: domain Description: GIIM Note: maturase Location: 26830-27046 bp Feature: domain Description: GIIM Note: maturase Location: 2683 0-27046 bp Feature: gene Location: 27347-28642 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 27359-28628 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 273 59-28628 bp Feature: gene Location: 28655-29779 bp Feature: domain Description: PRK06019 Location: 28679-29768 bp Feature: domain Description: PRK06019 Location: 28679-29768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), RVT-GII, GIIM (pfam08388), Adenylsuccinate_lyase_1 (cd01360), PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed)

Seq: JVWZ01000065.1 Enterococcus faecium strain 1250_EFCM 305_25004_436852, whole genome shotgun sequence (25004 bp)
Overview 1 RT 1: 2076-7350 bp Neighborhood of RT #1 [2076, 8042] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 2076-3275 bp Feature: domain Description: Glucosaminidase Location: 2346-2742 bp Feature: domain Description: Glucosaminidase Location: 234 6-274 2 bp Feature: domain Description: Peptidase_M23 Location: 2919-3156 bp Feature: domain Description: Peptidase_M23 Location: 2919-3156 bp Feature: gene Location: 3275-3595 bp Feature: gene Location: 3783-5660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4098-4836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 098-4 836 bp Feature: domain Description: HNHc Note: nucleases Location: 5394-5547 bp Feature: domain Description: HNHc Note: nucleases Location: 5394 -554 7 bp Feature: gene Location: 5847-6080 bp Feature: gene Location: 6348-8042 bp Feature: domain Description: VirB4 Location: 6666-7350 bp Feature: domain Description: VirB4 Location: 6666-7350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: JVWZ01000071.1 Enterococcus faecium strain 1250_EFCM 325_2999_38369, whole genome shotgun sequence (2999 bp)
Overview 1 RT 1: 2-2167 bp Neighborhood of RT #1 [2, 2280] FtsK RVT-GII HNHc Feature: gene Location: 2-304 bp Feature: domain Description: FtsK Location: 14-254 bp Feature: domain Description: FtsK Location: 14-25 4 bp Feature: gene Location: 406-2280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-1468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772-1468 bp Feature: domain Description: HNHc Note: nucleases Location: 2008-2167 bp Feature: domain Description: HNHc Note: nucleases Location: 2008-2167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), RVT-GII, HNHc (smart00507)