myRT

myRT report for GCA_001076455.1_ASM107645v1

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Seq: JVGI01000015.1 Escherichia coli strain 457.rep2_ECOL 1301_56520_2443235_105_,...,201_, whole genome shotgun sequence (56520 bp)
Overview 1 RT 1: 46206-49611 bp Neighborhood of RT #1 [46206, 49634] PRK15211 RVT-UG4 DUF4222 Feature: gene Location: 46206-46901 bp Feature: domain Description: PRK15211 Location: 46212-46893 bp Feature: domain Description: PRK1 521 1 Location: 4621 2-46893 bp Feature: gene Location: 46908-47480 bp Feature: gene Location: 47477-48463 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47819-48260 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4781 9-48260 bp Feature: gene Location: 48480-49292 bp Feature: gene Location: 49440-49634 bp Feature: domain Description: DUF4222 Location: 49461-49611 bp Feature: domain Description: DUF4222 Location: 49461 -4961 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15211 (fimbrial chaperone), RVT-UG4, DUF4222 (pfam13973)

Seq: JVGI01000100.1 Escherichia coli strain 457.rep2_ECOL 1401_146645_3243671_1034+,...,700_, whole genome shotgun sequence (146645 bp)
Overview 1 RT 1: 21064-28764 bp Neighborhood of RT #1 [21064, 28901] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 21064-22317 bp Feature: domain Description: proA Location: 21091-22282 bp Feature: domain Description: proA Location: 2 1091-2 2 2 82 bp Feature: gene Location: 22870-23340 bp Feature: gene Location: 23687-26896 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24215-24704 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 42 15-2 4704 bp Feature: domain Description: nitrilase Location: 26210-26807 bp Feature: domain Description: nitrilase Location: 2 62 10-2 6807 bp Feature: gene Location: 27191-27994 bp Feature: domain Description: AbiEi_3_N Location: 27224-27485 bp Feature: domain Description: AbiEi_3_N Location: 2 72 2 4-2 7485 bp Feature: domain Description: AbiEi_3 Location: 27497-27953 bp Feature: domain Description: AbiEi_3 Location: 2 7497-2 7953 bp Feature: gene Location: 27981-28901 bp Feature: domain Description: AbiEii Location: 28023-28764 bp Feature: domain Description: AbiEii Location: 2 802 3-2 8764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)