myRT

myRT report for GCA_001076525.1_ASM107652v1

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Seq: JVDU01000197.1 Klebsiella variicola strain 521_SSON 4237_1610_109249_720+,4007+, whole genome shotgun sequence (1610 bp)
Overview 1 RT 1: 277-1216 bp Neighborhood of RT #1 [277, 1608] RVT-GII Feature: gene Location: 277-1608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526-1216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526-1 21 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JVDU01000360.1 Klebsiella variicola strain 521_SSON 4414_12109_206299_3130+,1989+,3130_, whole genome shotgun sequence (12109 bp)
Overview 1 RT 1: 8230-11978 bp Neighborhood of RT #1 [8230, 11983] InsE PHA02517 RVT-GII GIIM PHA02517 IS5 Feature: gene Location: 8230-8535 bp Feature: domain Description: InsE Location: 8239-8509 bp Feature: domain Description: InsE Location: 82 39-8509 bp Feature: gene Location: 8613-8933 bp Feature: domain Description: PHA02517 Location: 8646-8916 bp Feature: domain Description: PHA02 517 Location: 8646-8916 bp Feature: gene Location: 9576-11096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9849-10578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9849-10578 bp Feature: domain Description: GIIM Note: maturase Location: 10650-10851 bp Feature: domain Description: GIIM Note: maturase Location: 10650-10851 bp Feature: gene Location: 11225-11644 bp Feature: domain Description: PHA02517 Location: 11228-11639 bp Feature: domain Description: PHA02 517 Location: 112 2 8-11639 bp Feature: gene Location: 11663-11983 bp Feature: domain Description: IS5 Location: 11678-11978 bp Feature: domain Description: IS5 Location: 11678-11978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), IS5 (COG3039), InsE (COG2963), RVT-GII, GIIM (pfam08388)

Seq: JVDU01000435.1 Klebsiella variicola strain 521_SSON 4493_1785_141957_4007+,2126+,3542+, whole genome shotgun sequence (1785 bp)
Overview 1 RT 1: 59-1782 bp Neighborhood of RT #1 [59, 1782] RVT-GII Feature: gene Location: 59-1396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314-1004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 14-1004 bp Feature: gene Location: 1543-1782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JVDU01000436.1 Klebsiella variicola strain 521_SSON 4494_10536_228628_4007_,322+, whole genome shotgun sequence (10536 bp)
Overview 1 RT 1: 3-2939 bp Neighborhood of RT #1 [3, 2939] RVT-GII INT_Cre_C Feature: gene Location: 3-1334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252-94 2 bp Feature: gene Location: 1420-2556 bp Feature: domain Description: INT_Cre_C Location: 1843-2497 bp Feature: domain Description: INT_Cre_C Location: 184 3-24 97 bp Feature: gene Location: 2622-2939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII

Seq: JVDU01000437.1 Klebsiella variicola strain 521_SSON 4495_4680_202284_4007_,...,79+, whole genome shotgun sequence (4680 bp)
Overview 1 RT 1: 3-3091 bp Neighborhood of RT #1 [3, 3228] RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 3-1334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 2-942 bp Feature: gene Location: 1580-2554 bp Feature: domain Description: StbA Location: 1586-2531 bp Feature: domain Description: StbA Location: 15 86-25 31 bp Feature: gene Location: 2557-3228 bp Feature: domain Description: Plasmid_stab_B Location: 2572-2779 bp Feature: domain Description: Plasmid_stab_B Location: 25 72-2779 bp Feature: domain Description: Plasmid_stab_B Location: 2884-3091 bp Feature: domain Description: Plasmid_stab_B Location: 2884-3091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), Plasmid_stab_B (pfam10784), RVT-GII

Seq: JVDU01000438.1 Klebsiella variicola strain 521_SSON 4496_15025_318817_4007_,...,705+, whole genome shotgun sequence (15025 bp)
Overview 1 RT 1: 3-2594 bp Neighborhood of RT #1 [3, 2620] RVT-GII PRK10276 DEDDh Feature: gene Location: 3-1334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252-942 bp Feature: gene Location: 1419-1841 bp Feature: domain Description: PRK10276 Location: 1425-1827 bp Feature: domain Description: PRK10276 Location: 1425-1827 bp Feature: gene Location: 2072-2620 bp Feature: domain Description: DEDDh Location: 2099-2594 bp Feature: domain Description: DEDDh Location: 2099-2594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DEDDh (cd06127), RVT-GII