myRT

myRT report for GCA_001076675.1_ASM107667v1

Download annotations/find similar RTs

Seq: JVMK01000139.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 1001_7269_308166_864+,...,75_, whole genome shotgun sequence (7269 bp)
Overview 1 RT 1: 3-2333 bp Neighborhood of RT #1 [3, 2333] RVT-GII INT_Cre_C Feature: gene Location: 3-728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-336 bp Feature: gene Location: 814-1950 bp Feature: domain Description: INT_Cre_C Location: 1237-1891 bp Feature: domain Description: INT_Cre_C Location: 1 237-1 891 bp Feature: gene Location: 2016-2333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_Cre_C (cd00799)

Seq: JVMK01000140.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 1002_58668_1463967_864+,761+,493+, whole genome shotgun sequence (58668 bp)
Overview 1 RT 1: 3-2551 bp Neighborhood of RT #1 [3, 2553] RVT-GII PRK05451 PRK10598 Feature: gene Location: 3-728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-336 bp Feature: gene Location: 821-1867 bp Feature: domain Description: PRK05451 Location: 836-1862 bp Feature: domain Description: PRK05451 Location: 836-1862 bp Feature: gene Location: 1993-2553 bp Feature: domain Description: PRK10598 Location: 1996-2551 bp Feature: domain Description: PRK10598 Location: 1996-2 551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK05451 (dihydroorotase; Provisional), PRK10598 (lipoprotein; Provisional)

Seq: JVMK01000026.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 877_9057_377111_90+,473+, whole genome shotgun sequence (9057 bp)
Overview 1 RT 1: 5928-8552 bp Neighborhood of RT #1 [5928, 8797] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 5928-6230 bp Feature: domain Description: InsE Location: 5937-6219 bp Feature: domain Description: InsE Location: 593 7-6219 bp Feature: gene Location: 6257-6682 bp Feature: domain Description: PHA02517 Location: 6281-6617 bp Feature: domain Description: PHA02517 Location: 6281-6617 bp Feature: gene Location: 7274-8797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7547-8279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7547-8279 bp Feature: domain Description: GIIM Note: maturase Location: 8354-8552 bp Feature: domain Description: GIIM Note: maturase Location: 83 54-8552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JVMK01000033.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 885_41230_1067816_115+,...,864_, whole genome shotgun sequence (41230 bp)
Overview 1 RT 1: 38737-40836 bp Neighborhood of RT #1 [38737, 41228] umuC PRK10276 RVT-GII Feature: gene Location: 38737-40002 bp Feature: domain Description: umuC Location: 38740-40000 bp Feature: domain Description: umuC Location: 3874 0-4 0000 bp Feature: gene Location: 40004-40423 bp Feature: domain Description: PRK10276 Location: 40007-40418 bp Feature: domain Description: PRK10276 Location: 4 0007-4 04 18 bp Feature: gene Location: 40503-41228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40506-40836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 0506-4 0836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JVMK01000048.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 905_12109_337333_358+,335+,358_, whole genome shotgun sequence (12109 bp)
Overview 1 RT 1: 8230-11978 bp Neighborhood of RT #1 [8230, 11983] InsE PHA02517 RVT-GII GIIM PHA02517 IS5 Feature: gene Location: 8230-8535 bp Feature: domain Description: InsE Location: 8239-8509 bp Feature: domain Description: InsE Location: 8239-85 09 bp Feature: gene Location: 8613-8933 bp Feature: domain Description: PHA02517 Location: 8646-8916 bp Feature: domain Description: PHA025 17 Location: 8646-8916 bp Feature: gene Location: 9576-11096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9849-10578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9849-105 78 bp Feature: domain Description: GIIM Note: maturase Location: 10650-10851 bp Feature: domain Description: GIIM Note: maturase Location: 1065 0-1085 1 bp Feature: gene Location: 11225-11644 bp Feature: domain Description: PHA02517 Location: 11228-11639 bp Feature: domain Description: PHA025 17 Location: 11228-11639 bp Feature: gene Location: 11663-11983 bp Feature: domain Description: IS5 Location: 11678-11978 bp Feature: domain Description: IS5 Location: 11678-11978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), IS5 (COG3039)

Seq: JVMK01000053.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 910_17774_529349_399+,...,542_, whole genome shotgun sequence (17774 bp)
Overview 1 RT 1: 15868-17774 bp Neighborhood of RT #1 [15868, 17773] bssS PRK10597 RVT-GII Feature: gene Location: 15868-16125 bp Feature: domain Description: bssS Location: 15874-16123 bp Feature: domain Description: bssS Location: 15874-16 123 bp Feature: gene Location: 16425-16676 bp Feature: domain Description: PRK10597 Location: 16428-16665 bp Feature: domain Description: PRK10597 Location: 16 428-16 6 6 5 bp Feature: gene Location: 17078-17773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17483-17774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17483-17774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bssS (PRK12301), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII

Seq: JVMK01000056.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 913_9195_467024_403+,...,542_, whole genome shotgun sequence (9195 bp)
Overview 1 RT 1: 7468-9195 bp Neighborhood of RT #1 [7468, 9194] RVT-GII Feature: gene Location: 7468-7962 bp Feature: gene Location: 8091-8474 bp Feature: gene Location: 8499-9194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8904-9195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8904-9195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JVMK01000061.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 918_23516_598292_424+,864_, whole genome shotgun sequence (23516 bp)
Overview 1 RT 1: 21023-23122 bp Neighborhood of RT #1 [21023, 23514] umuC PRK10276 RVT-GII Feature: gene Location: 21023-22288 bp Feature: domain Description: umuC Location: 21026-22286 bp Feature: domain Description: umuC Location: 21026-2228 6 bp Feature: gene Location: 22291-22710 bp Feature: domain Description: PRK10276 Location: 22294-22705 bp Feature: domain Description: PRK10276 Location: 22294-22705 bp Feature: gene Location: 22789-23514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22792-23122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22792-23122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JVMK01000069.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 926_4052_270045_473_,619+, whole genome shotgun sequence (4052 bp)
Overview 1 RT 1: 1-2736 bp Neighborhood of RT #1 [1, 2801] RVT-GII GIIM PHA02517 Feature: gene Location: 1-174 bp Feature: gene Location: 261-1784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 534-1266 bp Feature: domain Description: GIIM Note: maturase Location: 1341-1539 bp Feature: domain Description: GIIM Note: maturase Location: 1341-1539 bp Feature: gene Location: 1738-2163 bp Feature: gene Location: 2376-2801 bp Feature: domain Description: PHA02517 Location: 2400-2736 bp Feature: domain Description: PHA02517 Location: 2400-2736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JVMK01000082.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 941_2708_193654_542+,...,680+, whole genome shotgun sequence (2708 bp)
Overview 1 RT 1: 2-1966 bp Neighborhood of RT #1 [2, 2007] RVT-GII XerC Feature: gene Location: 2-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-698 bp Feature: gene Location: 703-870 bp Feature: gene Location: 1591-2007 bp Feature: domain Description: XerC Location: 1621-1966 bp Feature: domain Description: XerC Location: 1621-1966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, XerC (COG4973)

Seq: JVMK01000095.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 955_14359_452012_626+,...,542_, whole genome shotgun sequence (14359 bp)
Overview 1 RT 1: 11302-14359 bp Neighborhood of RT #1 [11302, 14358] HEPN_LA2681 RVT-GII Feature: gene Location: 11302-13038 bp Feature: domain Description: HEPN_LA2681 Location: 12127-12682 bp Feature: domain Description: HEPN_LA2681 Location: 12127-12682 bp Feature: gene Location: 13291-13638 bp Feature: gene Location: 13663-14358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14068-14359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14068-14359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_LA2681 (pfam18733), RVT-GII

Seq: JVMK01000096.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 956_4143_234982_645+,...,542_, whole genome shotgun sequence (4143 bp)
Overview 1 RT 1: 2680-4143 bp Neighborhood of RT #1 [2680, 4142] HHA RVT-GII Feature: gene Location: 2680-2931 bp Feature: domain Description: HHA Location: 2728-2911 bp Feature: domain Description: HHA Location: 2728-2911 bp Feature: gene Location: 3208-3450 bp Feature: gene Location: 3525-4142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3852-4143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3852-4143 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII

Seq: JVMK01000105.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 965_4893_360387_695+,274+,473_, whole genome shotgun sequence (4893 bp)
Overview 1 RT 1: 334-4427 bp Neighborhood of RT #1 [334, 4492] COG3547 RVT-GII GIIM PHA02517 Feature: gene Location: 334-1410 bp Feature: domain Description: COG3547 Location: 373-1294 bp Feature: domain Description: COG3547 Location: 373-1294 bp Feature: gene Location: 1659-1865 bp Feature: gene Location: 1952-3475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2225-2957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2225-2957 bp Feature: domain Description: GIIM Note: maturase Location: 3032-3230 bp Feature: domain Description: GIIM Note: maturase Location: 3032-3230 bp Feature: gene Location: 3429-3854 bp Feature: gene Location: 4067-4492 bp Feature: domain Description: PHA02517 Location: 4091-4427 bp Feature: domain Description: PHA02517 Location: 4091-4427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JVMK01000110.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 970_40444_1307382_709+,...,115_, whole genome shotgun sequence (40444 bp)
Overview 1 RT 1: 36561-40439 bp Neighborhood of RT #1 [36561, 40441] RVT-Retrons DDE_Tnp_IS1 Feature: gene Location: 36561-36932 bp Feature: gene Location: 37149-38444 bp Feature: gene Location: 38633-39796 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38858-39533 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38858-39533 bp Feature: gene Location: 39943-40194 bp Feature: gene Location: 40205-40441 bp Feature: domain Description: DDE_Tnp_IS1 Location: 40208-40439 bp Feature: domain Description: DDE_Tnp_IS1 Location: 40208-40439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DDE_Tnp_IS1 (pfam03400)

Seq: JVMK01000114.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 974_38108_1118089_754_,...,406_, whole genome shotgun sequence (38108 bp)
Overview 1 RT 1: 3728-13741 bp Neighborhood of RT #1 [3728, 13773] YeeA YeeA RVT-UG5 YeeA TIGR02687 Feature: gene Location: 3728-5662 bp Feature: domain Description: YeeA Location: 4367-5078 bp Feature: domain Description: YeeA Location: 4367-5078 bp Feature: domain Description: YeeA Location: 5234-5558 bp Feature: domain Description: YeeA Location: 5234-5558 bp Feature: gene Location: 5685-6149 bp Feature: gene Location: 6166-9168 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6628-7117 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 6628-7117 bp Feature: gene Location: 9168-10952 bp Feature: domain Description: YeeA Location: 9201-10884 bp Feature: domain Description: YeeA Location: 9201-10884 bp Feature: gene Location: 11170-13773 bp Feature: domain Description: TIGR02687 Location: 11188-13741 bp Feature: domain Description: TIGR02687 Location: 11188-13741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeA (COG1002), RVT-UG5, TIGR02687 (TIGR02687 family protein)

Seq: JVMK01000131.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 993_8205_383726_862+,...,473+, whole genome shotgun sequence (8205 bp)
Overview 1 RT 1: 5076-7700 bp Neighborhood of RT #1 [5076, 7945] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 5076-5378 bp Feature: domain Description: InsE Location: 5085-5367 bp Feature: domain Description: InsE Location: 5085-5367 bp Feature: gene Location: 5405-5830 bp Feature: domain Description: PHA02517 Location: 5429-5765 bp Feature: domain Description: PHA02517 Location: 5429-5765 bp Feature: gene Location: 6422-7945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6695-7427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6695-7427 bp Feature: domain Description: GIIM Note: maturase Location: 7502-7700 bp Feature: domain Description: GIIM Note: maturase Location: 7502-7700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JVMK01000136.1 Klebsiella pneumoniae subsp. pneumoniae strain 298_SBOY 998_14883_470930_863_,640+,864_, whole genome shotgun sequence (14883 bp)
Overview 1 RT 1: 12870-14489 bp Neighborhood of RT #1 [12870, 14881] DEDDh PRK10276 RVT-GII Feature: gene Location: 12870-13418 bp Feature: domain Description: DEDDh Location: 12897-13392 bp Feature: domain Description: DEDDh Location: 12897-13392 bp Feature: gene Location: 13649-14071 bp Feature: domain Description: PRK10276 Location: 13655-14057 bp Feature: domain Description: PRK10276 Location: 13655-14057 bp Feature: gene Location: 14156-14881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14159-14489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14159-14489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDDh (cd06127), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII