myRT

myRT report for GCA_001077755.1_ASM107775v1

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Seq: LFOF01000089.1 Mycobacterium heckeshornense strain RLE Mheck_contig000089, whole genome shotgun sequence (5307 bp)
Overview 1 RT 1: 385-5153 bp Neighborhood of RT #1 [385, 5254] COX4_pro NorE_like RVT-GII GIIM HTH_Tnp_1 Transposase_mut Feature: gene Location: 385-651 bp Feature: domain Description: COX4_pro Location: 415-628 bp Feature: domain Description: COX4_pro Location: 41 5-628 bp Feature: gene Location: 653-1267 bp Feature: domain Description: NorE_like Location: 713-1262 bp Feature: domain Description: NorE_like Location: 71 3-1 262 bp Feature: gene Location: 2610-3998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2937-3567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2937-3567 bp Feature: domain Description: GIIM Note: maturase Location: 3651-3861 bp Feature: domain Description: GIIM Note: maturase Location: 3651 -3861 bp Feature: gene Location: 4565-4849 bp Feature: domain Description: HTH_Tnp_1 Location: 4580-4796 bp Feature: domain Description: HTH_Tnp_1 Location: 4580-4796 bp Feature: gene Location: 5003-5254 bp Feature: domain Description: Transposase_mut Location: 5009-5153 bp Feature: domain Description: Transposase_mut Location: 5009-51 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COX4_pro (pfam03626), Transposase_mut (pfam00872), NorE_like (cd02862)

Seq: LFOF01000116.1 Mycobacterium heckeshornense strain RLE Mheck_contig000116, whole genome shotgun sequence (2168 bp)
Overview 1 RT 1: 111-1416 bp Neighborhood of RT #1 [111, 1559] RVT-GII GIIM Feature: gene Location: 111-1559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 6-1113 bp Feature: domain Description: GIIM Note: maturase Location: 1185-1416 bp Feature: domain Description: GIIM Note: maturase Location: 1185-1416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LFOF01000046.1 Mycobacterium heckeshornense strain RLE Mheck_contig000046, whole genome shotgun sequence (27208 bp)
Overview 1 RT 1: 1822-7652 bp Neighborhood of RT #1 [1822, 7678] AbiEii AbiEi_4 RVT-GII GIIM T7SS_ESX_EspC Feature: gene Location: 1822-2838 bp Feature: domain Description: AbiEii Location: 1969-2596 bp Feature: domain Description: AbiEii Location: 1969-2596 bp Feature: gene Location: 2835-3527 bp Feature: domain Description: AbiEi_4 Location: 2874-3003 bp Feature: domain Description: AbiEi_4 Location: 2874-3 003 bp Feature: gene Location: 3638-5011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3989-4613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 989-4613 bp Feature: domain Description: GIIM Note: maturase Location: 4706-4919 bp Feature: domain Description: GIIM Note: maturase Location: 4706-4919 bp Feature: gene Location: 6732-7109 bp Feature: gene Location: 7349-7678 bp Feature: domain Description: T7SS_ESX_EspC Location: 7358-7652 bp Feature: domain Description: T7SS_ESX_EspC Location: 73 58-7652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_4 (pfam13338), RVT-GII, GIIM (pfam08388), T7SS_ESX_EspC (pfam10824)