myRT

myRT report for GCA_001078155.1_ASM107815v1

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Seq: LFCC01000070.1 Salmonella enterica strain Sal25 contig_74, whole genome shotgun sequence (81560 bp)
Overview 1 RT 1: 31906-36831 bp Neighborhood of RT #1 [31906, 36839] INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 31906-32628 bp Feature: domain Description: INT_P4_C Location: 32026-32557 bp Feature: domain Description: INT_P4_C Location: 32026-32557 bp Feature: gene Location: 32953-33915 bp Feature: gene Location: 33915-34850 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34026-34611 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34026-3461 1 bp Feature: gene Location: 35098-35307 bp Feature: gene Location: 35652-36839 bp Feature: domain Description: PRK10473 Location: 35655-36831 bp Feature: domain Description: PRK1 0473 Location: 35655-36831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)

Seq: LFCC01000075.1 Salmonella enterica strain Sal25 contig_79, whole genome shotgun sequence (253698 bp)
Overview 1 RT 1: 183522-189647 bp Neighborhood of RT #1 [183522, 189829] PRK05658 PRK10201 RVT-UG11 5 Feature: gene Location: 183522-185504 bp Feature: domain Description: PRK05658 Location: 183660-185502 bp Feature: domain Description: PRK05658 Location: 183660-185502 bp Feature: gene Location: 185628-186134 bp Feature: domain Description: PRK10201 Location: 185631-186129 bp Feature: domain Description: PRK102 01 Location: 185631-18612 9 bp Feature: gene Location: 186458-187222 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 186581-187034 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 186581-187034 bp Feature: gene Location: 187832-187999 bp Feature: gene Location: 188129-189829 bp Feature: domain Description: 5 Location: 189353-189647 bp Feature: domain Description: 5 Location: 189353-189647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11, 5 (PHA02596)