myRT

myRT report for GCA_001080405.1_10060_6_57

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Seq: CIPG01000018.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 10060_6#57, scaffold ERS223563SCcontig000018, whole genome shotgun sequence (105537 bp)
Overview 1 RT 1: 38200-43472 bp Neighborhood of RT #1 [38200, 43489] type_I_sec_LssB type_I_hlyD type_I_hlyD RVT-UG11 PRK09678 Feature: gene Location: 38200-40356 bp Ori: CGL34464.1 Gene: apxIB_2 Feature: domain Description: type_I_sec_LssB Location: 38260-40333 bp Feature: domain Description: type_I_sec_LssB Location: 38260-40333 bp Feature: gene Location: 40361-41551 bp Ori: CGL34507.1 Gene: prsE_2 Feature: domain Description: type_I_hlyD Location: 40442-40886 bp Feature: domain Description: type_I_hlyD Location: 40442-40886 bp Feature: domain Description: type_I_hlyD Location: 40925-41549 bp Feature: domain Description: type_I_hlyD Location: 40925-41 549 bp Feature: gene Location: 42094-42867 bp Ori: CGL34555.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 42229-42682 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 42229-42682 bp Feature: gene Location: 42836-43009 bp Feature: gene Location: 43271-43489 bp Ori: CGL34599.1 Gene: ogr Feature: domain Description: PRK09678 Location: 43274-43472 bp Feature: domain Description: PRK09678 Location: 43274-43472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_sec_LssB (TIGR03375), type_I_hlyD (TIGR01843), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)