myRT

myRT report for GCA_001080725.1_10060_5_70

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Seq: CIMZ01000002.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 10060_5#70, scaffold ERS223296SCcontig000002, whole genome shotgun sequence (300300 bp)
Overview 1 RT 1: 38386-43658 bp Neighborhood of RT #1 [38386, 43675] type_I_sec_LssB type_I_hlyD type_I_hlyD RVT-UG11 PRK09678 Feature: gene Location: 38386-40542 bp Ori: CGH24979.1 Gene: apxIB_1 Feature: domain Description: type_I_sec_LssB Location: 38446-40519 bp Feature: domain Description: type_I_sec_LssB Location: 38446-4051 9 bp Feature: gene Location: 40547-41737 bp Ori: CGH25013.1 Gene: prsE_1 Feature: domain Description: type_I_hlyD Location: 40628-41072 bp Feature: domain Description: type_I_hlyD Location: 40628-41 072 bp Feature: domain Description: type_I_hlyD Location: 41111-41735 bp Feature: domain Description: type_I_hlyD Location: 41 1 1 1 -41 735 bp Feature: gene Location: 42280-43053 bp Ori: CGH25089.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 42415-42868 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 4241 5-42868 bp Feature: gene Location: 43022-43195 bp Feature: gene Location: 43457-43675 bp Ori: CGH25139.1 Gene: ogr_1 Feature: domain Description: PRK09678 Location: 43460-43658 bp Feature: domain Description: PRK09678 Location: 43460-43658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_sec_LssB (TIGR03375), type_I_hlyD (TIGR01843), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)