myRT

myRT report for GCA_001082285.1_10071_8_32

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Seq: CISM01000002.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 10071_8#32, scaffold ERS239558SCcontig000002, whole genome shotgun sequence (515993 bp)
Overview 1 RT 1: 197052-202324 bp Neighborhood of RT #1 [197052, 202341] type_I_sec_LssB type_I_hlyD type_I_hlyD RVT-UG11 PRK09678 Feature: gene Location: 197052-199208 bp Ori: CGQ05415.1 Gene: apxIB Feature: domain Description: type_I_sec_LssB Location: 197112-199185 bp Feature: domain Description: type_I_sec_LssB Location: 1 971 1 2-1 991 85 bp Feature: gene Location: 199213-200403 bp Ori: CGQ05453.1 Gene: prsE_1 Feature: domain Description: type_I_hlyD Location: 199294-199738 bp Feature: domain Description: type_I_hlyD Location: 1 99294-1 99738 bp Feature: domain Description: type_I_hlyD Location: 199777-200401 bp Feature: domain Description: type_I_hlyD Location: 1 99777-200401 bp Feature: gene Location: 200946-201719 bp Ori: CGQ05500.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 201081-201534 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 201 081 -201 534 bp Feature: gene Location: 201688-201861 bp Feature: gene Location: 202123-202341 bp Ori: CGQ05555.1 Gene: ogr Feature: domain Description: PRK09678 Location: 202126-202324 bp Feature: domain Description: PRK09678 Location: 2021 26-202324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_sec_LssB (TIGR03375), type_I_hlyD (TIGR01843), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)