myRT

myRT report for GCA_001082465.1_10060_5_23

Download annotations/find similar RTs

Seq: CINP01000002.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 10060_5#23, scaffold ERS223249SCcontig000002, whole genome shotgun sequence (295892 bp)
Overview 1 RT 1: 38201-43473 bp Neighborhood of RT #1 [38201, 43490] type_I_sec_LssB type_I_hlyD type_I_hlyD RVT-UG11 PRK09678 Feature: gene Location: 38201-40357 bp Ori: CGH38958.1 Gene: apxIB_1 Feature: domain Description: type_I_sec_LssB Location: 38261-40334 bp Feature: domain Description: type_I_sec_LssB Location: 38261 -40334 bp Feature: gene Location: 40362-41552 bp Ori: CGH38988.1 Gene: prsE_1 Feature: domain Description: type_I_hlyD Location: 40443-40887 bp Feature: domain Description: type_I_hlyD Location: 40443-40887 bp Feature: domain Description: type_I_hlyD Location: 40926-41550 bp Feature: domain Description: type_I_hlyD Location: 40926-41 550 bp Feature: gene Location: 42095-42868 bp Ori: CGH39040.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 42230-42683 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 42230-42683 bp Feature: gene Location: 42837-43010 bp Feature: gene Location: 43272-43490 bp Ori: CGH39106.1 Gene: ogr Feature: domain Description: PRK09678 Location: 43275-43473 bp Feature: domain Description: PRK09678 Location: 43275-43473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_sec_LssB (TIGR03375), type_I_hlyD (TIGR01843), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)