myRT

myRT report for GCA_001083795.1_Nocardiopsis_sp_SBT349_SPAdes_SSPACE

Download annotations/find similar RTs

Seq: LAVK01000086.1 Streptomyces sp. SBT349 scaffold86_size23873, whole genome shotgun sequence (23873 bp)
Overview 1 RT 1: 1-3291 bp Neighborhood of RT #1 [1, 3389] DDE_3 RVT_N RVT-GII GIIM PRK07773 Feature: gene Location: 1-396 bp Feature: domain Description: DDE_3 Location: 16-265 bp Feature: domain Description: DDE_3 Location: 1 6-265 bp Feature: gene Location: 420-2141 bp Feature: RT Description: RVT_N Location: 489-726 bp Feature: RT Description: RVT_N Location: 489-726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 786-1 443 bp Feature: domain Description: GIIM Note: maturase Location: 1500-1728 bp Feature: domain Description: GIIM Note: maturase Location: 1 500-1 728 bp Feature: gene Location: 2304-2714 bp Feature: gene Location: 3012-3389 bp Feature: domain Description: PRK07773 Location: 3018-3291 bp Feature: domain Description: PRK07773 Location: 301 8-3291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), PRK07773 (replicative DNA helicase; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)