myRT

myRT report for GCA_001086525.1_4976_6_7

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Seq: CPZT01000016.1 Yersinia enterocolitica genome assembly 4976_6#7, scaffold ERS008634SCcontig000016, whole genome shotgun sequence (118546 bp)
Overview 1 RT 1: 83719-90779 bp Neighborhood of RT #1 [83719, 90790] COG4643 COG5519 Ogr_Delta RVT-Retrons PRK09692 Feature: gene Location: 83719-86403 bp Ori: CNG87958.1 Gene: traC_2 Feature: domain Description: COG4643 Location: 83728-84676 bp Feature: domain Description: COG4643 Location: 83728-84676 bp Feature: domain Description: COG5519 Location: 84820-86395 bp Feature: domain Description: COG551 9 Location: 84820-86395 bp Feature: gene Location: 86633-86980 bp Ori: CNG87986.1 Feature: domain Description: Ogr_Delta Location: 86657-86792 bp Feature: domain Description: Ogr_Delta Location: 86657-86792 bp Feature: gene Location: 87734-88930 bp Ori: CNG88012.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87884-88463 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87884-88463 bp Feature: gene Location: 88908-89621 bp Feature: gene Location: 89627-90790 bp Ori: CNG88048.1 Gene: intS_2 Feature: domain Description: PRK09692 Location: 89636-90779 bp Feature: domain Description: PRK09692 Location: 89636-90779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), COG5519 (Uncharcterized protein, DUF927 family ), Ogr_Delta (pfam04606), RVT-Retrons, PRK09692 (Integrase; provisional)