myRT

myRT report for GCA_001087365.1_6938_6_23

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Seq: CLLY01000009.1 Streptococcus pneumoniae genome assembly 6938_6#23, scaffold ERS022197SCcontig000009, whole genome shotgun sequence (52225 bp)
Overview 1 RT 1: 32156-41733 bp Neighborhood of RT #1 [32156, 41771] TraC-F-type PRK06149 Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 AbiEi_3_N AbiEii Feature: gene Location: 32156-34507 bp Feature: domain Description: TraC-F-type Location: 32645-34331 bp Feature: domain Description: TraC-F-type Location: 32645-34331 bp Feature: gene Location: 34509-37202 bp Feature: domain Description: PRK06149 Location: 35934-36195 bp Feature: domain Description: PRK061 49 Location: 35934-361 95 bp Feature: domain Description: Phage_lysozyme2 Location: 36306-36816 bp Feature: domain Description: Phage_lysozyme2 Location: 36306-3681 6 bp Feature: domain Description: PRK08581 Location: 36936-37185 bp Feature: domain Description: PRK08581 Location: 36936-371 85 bp Feature: gene Location: 37911-39833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38238-38973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38238-38973 bp Feature: domain Description: KOG4768 Location: 39120-39225 bp Feature: domain Description: KOG4768 Location: 391 20-39225 bp Feature: domain Description: cas_Csn1 Location: 39384-39663 bp Feature: domain Description: cas_Csn1 Location: 39384-39663 bp Feature: gene Location: 40168-40770 bp Feature: domain Description: AbiEi_3_N Location: 40186-40480 bp Feature: domain Description: AbiEi_3_N Location: 401 86-40480 bp Feature: gene Location: 40773-41771 bp Feature: domain Description: AbiEii Location: 40902-41733 bp Feature: domain Description: AbiEii Location: 40902-41 733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEi_3_N (pfam17194), AbiEii (pfam08843)