myRT

myRT report for GCA_001089145.1_6840_1_18

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Seq: CKYZ01000031.1 Streptococcus pneumoniae genome assembly 6840_1#18, scaffold ERS021280SCcontig000031, whole genome shotgun sequence (30178 bp)
Overview 1 RT 1: 12022-19686 bp Neighborhood of RT #1 [12022, 19724] 7tmA_5-HT1A_invertebrates Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 AbiEi_3_N AbiEii Feature: gene Location: 12022-14175 bp Feature: domain Description: 7tmA_5-HT1A_invertebrates Location: 12115-14032 bp Feature: domain Description: 7tmA_5-HT1 A_invertebrates Location: 1 21 1 5-1 4032 bp Feature: gene Location: 14175-15155 bp Feature: domain Description: Phage_lysozyme2 Location: 14388-14787 bp Feature: domain Description: Phage_lysozyme2 Location: 1 4388-1 4787 bp Feature: domain Description: PRK08581 Location: 14928-15138 bp Feature: domain Description: PRK08581 Location: 1 4928-1 51 38 bp Feature: gene Location: 15864-17786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16191-16926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 91 -1 6926 bp Feature: domain Description: KOG4768 Location: 17073-17178 bp Feature: domain Description: KOG4768 Location: 1 7073-1 71 78 bp Feature: domain Description: cas_Csn1 Location: 17337-17616 bp Feature: domain Description: cas_Csn1 Location: 1 7337-1 761 6 bp Feature: gene Location: 18121-18723 bp Feature: domain Description: AbiEi_3_N Location: 18139-18433 bp Feature: domain Description: AbiEi_3_N Location: 1 81 39-1 8433 bp Feature: gene Location: 18726-19724 bp Feature: domain Description: AbiEii Location: 18855-19686 bp Feature: domain Description: AbiEii Location: 1 8855-1 9686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 7tmA_5-HT1A_invertebrates (cd15331), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEi_3_N (pfam17194), AbiEii (pfam08843)