myRT

myRT report for GCA_001090445.1_4976_6_8

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Seq: CPXH01000008.1 Yersinia enterocolitica genome assembly 4976_6#8, scaffold ERS008635SCcontig000008, whole genome shotgun sequence (114919 bp)
Overview 1 RT 1: 13220-19923 bp Neighborhood of RT #1 [13220, 19949] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 13220-13495 bp Ori: CND34518.1 Feature: domain Description: TraD Location: 13298-13475 bp Feature: domain Description: TraD Location: 1 3298-1 3475 bp Feature: gene Location: 13683-14999 bp Ori: CND34550.1 Feature: domain Description: Shufflon_N Location: 13827-14763 bp Feature: domain Description: Shufflon_N Location: 1 3827-1 4763 bp Feature: gene Location: 15665-16036 bp Ori: CND34614.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15803-16034 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5803-1 6034 bp Feature: gene Location: 16200-17387 bp Ori: CND34643.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16203-16428 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6203-1 6428 bp Feature: gene Location: 17540-18640 bp Feature: gene Location: 18720-19949 bp Ori: CND34694.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 18723-19923 bp Feature: domain Description: PRK09692 Location: 1 8723-1 9923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)