myRT

myRT report for GCA_001090605.2_6999_7_21

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Seq: CNVO02000089.1 Streptococcus pneumoniae genome assembly 6999_7#21, scaffold 403790_contig_180, whole genome shotgun sequence (32232 bp)
Overview 1 RT 1: 3423-10793 bp Neighborhood of RT #1 [3423, 10798] AceF lipoamide_DH Lip_prot_lig_C RVT-GII GIIM xerS EriC TrkA_C Feature: gene Location: 3423-5126 bp Feature: domain Description: AceF Location: 3426-3723 bp Feature: domain Description: AceF Location: 3426-3723 bp Feature: domain Description: lipoamide_DH Location: 3759-5109 bp Feature: domain Description: lipoamide_DH Location: 3759-51 09 bp Feature: gene Location: 5197-5550 bp Feature: domain Description: Lip_prot_lig_C Location: 5290-5536 bp Feature: domain Description: Lip_prot_lig_C Location: 5290-5536 bp Feature: gene Location: 5715-6893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5919-6534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591 9-6534 bp Feature: domain Description: GIIM Note: maturase Location: 6588-6801 bp Feature: domain Description: GIIM Note: maturase Location: 6588-6801 bp Feature: gene Location: 7594-8664 bp Feature: domain Description: xerS Location: 7597-8662 bp Feature: domain Description: xerS Location: 7597-8662 bp Feature: gene Location: 9248-10798 bp Feature: domain Description: EriC Location: 9341-10553 bp Feature: domain Description: EriC Location: 9341 -1 0553 bp Feature: domain Description: TrkA_C Location: 10598-10793 bp Feature: domain Description: TrkA_C Location: 1 0598-1 0793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AceF (COG0508), lipoamide_DH (TIGR01350), Lip_prot_lig_C (pfam10437), RVT-GII, GIIM (pfam08388), xerS (PRK05084), EriC (cd01031), TrkA_C (pfam02080)

Seq: CNVO02000177.1 Streptococcus pneumoniae genome assembly 6999_7#21, scaffold 403790_contig_81, whole genome shotgun sequence (76886 bp)
Overview 1 RT 1: 13447-22704 bp Neighborhood of RT #1 [13447, 22886] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 13447-14037 bp Feature: domain Description: COG5340 Location: 13450-13882 bp Feature: domain Description: COG5340 Location: 13450-13882 bp Feature: gene Location: 14034-14879 bp Feature: domain Description: AbiEii Location: 14133-14832 bp Feature: domain Description: AbiEii Location: 14133-14832 bp Feature: gene Location: 15229-17151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15556-16291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15556-162 91 bp Feature: domain Description: cas_Csn1 Location: 16702-16981 bp Feature: domain Description: cas_Csn1 Location: 16702 -16981 bp Feature: gene Location: 17860-20538 bp Feature: domain Description: Peptidase_M23 Location: 19306-19510 bp Feature: domain Description: Peptidase_M2 3 Location: 19306-19510 bp Feature: domain Description: Phage_lysozyme2 Location: 19663-20173 bp Feature: domain Description: Phage_lysozyme2 Location: 19663-2 0173 bp Feature: domain Description: COG3942 Location: 20251-20521 bp Feature: domain Description: COG3942 Location: 2 02 51-2 052 1 bp Feature: gene Location: 20535-22886 bp Feature: domain Description: TraC-F-type Location: 21321-22704 bp Feature: domain Description: TraC-F-type Location: 2 132 1-2 2 704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)