myRT

myRT report for GCA_001094705.1_6925_3_16

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Seq: CLFO01000002.1 Streptococcus pneumoniae genome assembly 6925_3#16, scaffold ERS021638SCcontig000002, whole genome shotgun sequence (144681 bp)
Overview 1 RT 1: 45836-56005 bp Neighborhood of RT #1 [45836, 56005] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 45836-46387 bp Feature: gene Location: 46437-51878 bp Feature: domain Description: N6_Mtase Location: 48429-49020 bp Feature: domain Description: N6_Mtase Location: 48429-49020 bp Feature: domain Description: COG4646 Location: 49611-51735 bp Feature: domain Description: COG4646 Location: 4961 1 -51 735 bp Feature: gene Location: 52376-54154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52637-53429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52637-53429 bp Feature: domain Description: Intron_maturas2 Location: 53534-53765 bp Feature: domain Description: Intron_maturas2 Location: 53534-53765 bp Feature: domain Description: HNHc Note: nucleases Location: 53930-54116 bp Feature: domain Description: HNHc Note: nucleases Location: 53930-541 1 6 bp Feature: gene Location: 54292-55635 bp Feature: domain Description: KOG1000 Location: 54571-54886 bp Feature: domain Description: KOG1 000 Location: 54571 -54886 bp Feature: gene Location: 55706-56005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )