myRT

myRT report for GCA_001097205.1_6972_4_5

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Seq: CLTC01000015.1 Streptococcus pneumoniae genome assembly 6972_4#5, scaffold ERS022107SCcontig000015, whole genome shotgun sequence (60029 bp)
Overview 1 RT 1: 13853-23110 bp Neighborhood of RT #1 [13853, 23292] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 13853-14443 bp Feature: domain Description: COG5340 Location: 13856-14288 bp Feature: domain Description: COG5340 Location: 1 3856-1 4288 bp Feature: gene Location: 14440-15285 bp Feature: domain Description: AbiEii Location: 14539-15238 bp Feature: domain Description: AbiEii Location: 1 4539-1 5238 bp Feature: gene Location: 15635-17557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15962-16697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5962-1 6697 bp Feature: domain Description: cas_Csn1 Location: 17108-17387 bp Feature: domain Description: cas_Csn1 Location: 1 71 08-1 7387 bp Feature: gene Location: 18266-20944 bp Feature: domain Description: Peptidase_M23 Location: 19712-19916 bp Feature: domain Description: Peptidase_M23 Location: 1 971 2-1 991 6 bp Feature: domain Description: Phage_lysozyme2 Location: 20069-20576 bp Feature: domain Description: Phage_lysozyme2 Location: 20069-20576 bp Feature: domain Description: COG3942 Location: 20696-20927 bp Feature: domain Description: COG3942 Location: 20696-20927 bp Feature: gene Location: 20941-23292 bp Feature: domain Description: TraC-F-type Location: 21727-23110 bp Feature: domain Description: TraC-F-type Location: 21 727-231 1 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)

Seq: CLTC01000016.1 Streptococcus pneumoniae genome assembly 6972_4#5, scaffold ERS022107SCcontig000016, whole genome shotgun sequence (58442 bp)
Overview 1 RT 1: 45147-51092 bp Neighborhood of RT #1 [45147, 51097] MFS_MefA_like GIIM RVT-GII GIIM GlpF Feature: gene Location: 45147-46325 bp Feature: domain Description: MFS_MefA_like Location: 45162-46305 bp Feature: domain Description: MFS_MefA_like Location: 45162 -46305 bp Feature: gene Location: 46777-47085 bp Feature: domain Description: GIIM Note: maturase Location: 46804-46894 bp Feature: domain Description: GIIM Note: maturase Location: 46804-46894 bp Feature: gene Location: 47046-48053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47250-47865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 472 50-47865 bp Feature: domain Description: GIIM Note: maturase Location: 47919-48048 bp Feature: domain Description: GIIM Note: maturase Location: 47919-48048 bp Feature: gene Location: 49147-49806 bp Feature: gene Location: 50393-51097 bp Feature: domain Description: GlpF Location: 50396-51092 bp Feature: domain Description: GlpF Location: 50396-51092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), GIIM (pfam08388), RVT-GII, GlpF (COG0580)