myRT

myRT report for GCA_001097785.1_4840_7_8

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Seq: CPWQ01000068.1 Yersinia enterocolitica genome assembly 4840_7#8, scaffold ERS008537SCcontig000068, whole genome shotgun sequence (13453 bp)
Overview 1 RT 1: 7273-13253 bp Neighborhood of RT #1 [7273, 13279] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 7273-7548 bp Ori: CND58366.1 Feature: domain Description: TraD Location: 7351-7528 bp Feature: domain Description: TraD Location: 7351 -7528 bp Feature: gene Location: 7736-9052 bp Ori: CND58393.1 Feature: domain Description: Shufflon_N Location: 7880-8816 bp Feature: domain Description: Shufflon_N Location: 7880-881 6 bp Feature: gene Location: 9718-10089 bp Ori: CND58419.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9856-10087 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9856-1 0087 bp Feature: gene Location: 10253-11440 bp Ori: CND58449.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10256-10481 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0256-1 0481 bp Feature: gene Location: 11593-12693 bp Feature: gene Location: 12773-13279 bp Ori: CND58505.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 12779-13253 bp Feature: domain Description: PRK09692 Location: 1 2779-1 3253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)