myRT

myRT report for GCA_001102445.2_6925_1_64

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Seq: CNNN02000106.1 Streptococcus pneumoniae genome assembly 6925_1#64, scaffold R34-3046_contig_196, whole genome shotgun sequence (2295 bp)
Overview 1 RT 1: 120-1206 bp Neighborhood of RT #1 [120, 1397] RVT-GII GIIM Feature: gene Location: 120-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324-939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324-939 bp Feature: domain Description: GIIM Note: maturase Location: 993-1206 bp Feature: domain Description: GIIM Note: maturase Location: 993-1 206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CNNN02000063.1 Streptococcus pneumoniae genome assembly 6925_1#64, scaffold R34-3046_contig_157, whole genome shotgun sequence (69043 bp)
Overview 1 RT 1: 31830-41401 bp Neighborhood of RT #1 [31830, 41439] TraC-F-type PRK06149 Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 AbiEi_3_N AbiEii Feature: gene Location: 31830-34181 bp Feature: domain Description: TraC-F-type Location: 32319-34005 bp Feature: domain Description: TraC-F-type Location: 32 319-34005 bp Feature: gene Location: 34183-36876 bp Feature: domain Description: PRK06149 Location: 35608-35869 bp Feature: domain Description: PRK06149 Location: 35608-35869 bp Feature: domain Description: Phage_lysozyme2 Location: 35980-36490 bp Feature: domain Description: Phage_lysozyme2 Location: 35980-36490 bp Feature: domain Description: PRK08581 Location: 36610-36859 bp Feature: domain Description: PRK08581 Location: 36610-36859 bp Feature: gene Location: 37585-39507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37912-38647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37912 -38647 bp Feature: domain Description: KOG4768 Location: 38794-38899 bp Feature: domain Description: KOG4768 Location: 38794-38899 bp Feature: domain Description: cas_Csn1 Location: 39058-39337 bp Feature: domain Description: cas_Csn1 Location: 39058-39337 bp Feature: gene Location: 39815-40438 bp Feature: domain Description: AbiEi_3_N Location: 39854-40148 bp Feature: domain Description: AbiEi_3_N Location: 39854-40148 bp Feature: gene Location: 40441-41439 bp Feature: domain Description: AbiEii Location: 40570-41401 bp Feature: domain Description: AbiEii Location: 40570-41401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEi_3_N (pfam17194), AbiEii (pfam08843)