myRT

myRT report for GCA_001105745.1_7054_6_2

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Seq: CMLQ01000025.1 Streptococcus pneumoniae genome assembly 7054_6#2, scaffold ERS022584SCcontig000025, whole genome shotgun sequence (29459 bp)
Overview 1 RT 1: 8676-15639 bp Neighborhood of RT #1 [8676, 15794] Phage_lysozyme2 PRK08581 RVT-GII cas_Csn1 AbiEii COG5340 Feature: gene Location: 8676-9533 bp Feature: gene Location: 9645-11381 bp Feature: domain Description: Phage_lysozyme2 Location: 10485-10998 bp Feature: domain Description: Phage_lysozyme2 Location: 1 0485-1 0998 bp Feature: domain Description: PRK08581 Location: 11115-11364 bp Feature: domain Description: PRK08581 Location: 1 1 1 1 5-1 1 364 bp Feature: gene Location: 12090-14012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12417-13152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 241 7-1 31 52 bp Feature: domain Description: cas_Csn1 Location: 13563-13842 bp Feature: domain Description: cas_Csn1 Location: 1 3563-1 3842 bp Feature: gene Location: 14362-15207 bp Feature: domain Description: AbiEii Location: 14461-15160 bp Feature: domain Description: AbiEii Location: 1 4461 -1 51 60 bp Feature: gene Location: 15204-15794 bp Feature: domain Description: COG5340 Location: 15207-15639 bp Feature: domain Description: COG5340 Location: 1 5207-1 5639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865), AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)