myRT

myRT report for GCA_001107305.2_6999_4_14

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Seq: CNTJ02000172.1 Streptococcus pneumoniae genome assembly 6999_4#14, scaffold 118039_contig_98, whole genome shotgun sequence (58977 bp)
Overview 1 RT 1: 45597-50536 bp Neighborhood of RT #1 [45597, 50536] MFS_MefA_like MFS_MefA_like RVT-GII GIIM Feature: gene Location: 45597-46118 bp Ori: CTE27384.1 Feature: domain Description: MFS_MefA_like Location: 45630-46098 bp Feature: domain Description: MFS_MefA_like Location: 45630-46098 bp Feature: gene Location: 46064-46774 bp Ori: CTE27401.1 Feature: domain Description: MFS_MefA_like Location: 46079-46709 bp Feature: domain Description: MFS_MefA_like Location: 46079-46709 bp Feature: gene Location: 47229-48506 bp Ori: CTE27418.1 Gene: intron Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47433-48048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47433-48048 bp Feature: domain Description: GIIM Note: maturase Location: 48102-48315 bp Feature: domain Description: GIIM Note: maturase Location: 481 02-4831 5 bp Feature: gene Location: 49587-50246 bp Feature: gene Location: 50333-50536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388)

Seq: CNTJ02000034.1 Streptococcus pneumoniae genome assembly 6999_4#14, scaffold 118039_contig_130, whole genome shotgun sequence (89468 bp)
Overview 1 RT 1: 48412-53746 bp Neighborhood of RT #1 [48412, 53835] HTH_19 RVT-GII GIIM HTH_XRE RGG_Cterm NDP-sugDHase Feature: gene Location: 48412-48702 bp Ori: CTD91394.1 Feature: domain Description: HTH_19 Location: 48436-48604 bp Feature: domain Description: HTH_19 Location: 48436-48604 bp Feature: gene Location: 48752-49108 bp Feature: gene Location: 49898-51064 bp Ori: CTD91419.1 Gene: intron Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50102-50717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50102 -50717 bp Feature: domain Description: GIIM Note: maturase Location: 50774-50984 bp Feature: domain Description: GIIM Note: maturase Location: 50774-50984 bp Feature: gene Location: 51436-52287 bp Ori: CTD91433.1 Feature: domain Description: HTH_XRE Location: 51517-51622 bp Feature: domain Description: HTH_XRE Location: 51517-5162 2 bp Feature: domain Description: RGG_Cterm Location: 51625-52282 bp Feature: domain Description: RGG_Cterm Location: 5162 5-52 2 82 bp Feature: gene Location: 52540-53835 bp Ori: CTD91442.1 Feature: domain Description: NDP-sugDHase Location: 52585-53746 bp Feature: domain Description: NDP-sugDHase Location: 52 585-53746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), RGG_Cterm (TIGR01716), NDP-sugDHase (TIGR03026)

Seq: CNTJ02000078.1 Streptococcus pneumoniae genome assembly 6999_4#14, scaffold 118039_contig_170, whole genome shotgun sequence (282 bp)
Overview 1 RT 1: 5-281 bp Neighborhood of RT #1 [5, 282] RVT-GII Feature: gene Location: 5-282 bp Ori: CTD96986.1 Gene: intron Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209-281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209-281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII