myRT

myRT report for GCA_001110165.2_7622_5_61

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Seq: COET02000007.1 Streptococcus pneumoniae genome assembly 7622_5#61, scaffold MD5096_contig_106, whole genome shotgun sequence (83804 bp)
Overview 1 RT 1: 50111-54840 bp Neighborhood of RT #1 [50111, 54962] HTH_19 RVT-GII GIIM HTH_XRE RGG_Cterm KOG0409 Feature: gene Location: 50111-50401 bp Feature: domain Description: HTH_19 Location: 50135-50303 bp Feature: domain Description: HTH_1 9 Location: 501 35-50303 bp Feature: gene Location: 50451-50807 bp Feature: gene Location: 51543-52709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51747-52362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 747-52362 bp Feature: domain Description: GIIM Note: maturase Location: 52419-52629 bp Feature: domain Description: GIIM Note: maturase Location: 5241 9-52629 bp Feature: gene Location: 53262-53933 bp Feature: domain Description: HTH_XRE Location: 53343-53448 bp Feature: domain Description: HTH_XRE Location: 53343-53448 bp Feature: domain Description: RGG_Cterm Location: 53451-53919 bp Feature: domain Description: RGG_Cterm Location: 53451 -5391 9 bp Feature: gene Location: 54132-54962 bp Feature: domain Description: KOG0409 Location: 54258-54840 bp Feature: domain Description: KOG0409 Location: 54258-54840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_19 (pfam12844), RVT-GII, GIIM (pfam08388), HTH_XRE (smart00530), RGG_Cterm (TIGR01716), KOG0409 (KOG0409, Predicted dehydrogenase )