myRT

myRT report for GCA_001110565.1_5750_2_5

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Seq: CMVN01000022.1 Streptococcus pneumoniae genome assembly 5750_2#5, scaffold ERS096038SCcontig000022, whole genome shotgun sequence (38094 bp)
Overview 1 RT 1: 259-3411 bp Neighborhood of RT #1 [259, 3419] RVT-GII GIIM rpsA DUF2969 Feature: gene Location: 259-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1 078 bp Feature: domain Description: GIIM Note: maturase Location: 1132-1345 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 32-1 345 bp Feature: gene Location: 1614-2816 bp Feature: domain Description: rpsA Location: 1617-2805 bp Feature: domain Description: rpsA Location: 1 61 7-2805 bp Feature: gene Location: 3189-3419 bp Feature: domain Description: DUF2969 Location: 3192-3411 bp Feature: domain Description: DUF2969 Location: 31 92-341 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), RVT-GII, GIIM (pfam08388), DUF2969 (pfam11184)

Seq: CMVN01000027.1 Streptococcus pneumoniae genome assembly 5750_2#5, scaffold ERS096038SCcontig000027, whole genome shotgun sequence (26044 bp)
Overview 1 RT 1: 22326-25148 bp Neighborhood of RT #1 [22326, 25318] RVT-GII cas_Csn1 Feature: gene Location: 22326-22490 bp Feature: gene Location: 22492-23100 bp Feature: gene Location: 23396-25318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23723-24458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 372 3-2 4458 bp Feature: domain Description: cas_Csn1 Location: 24869-25148 bp Feature: domain Description: cas_Csn1 Location: 2 4869-2 5148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865)

Seq: CMVN01000042.1 Streptococcus pneumoniae genome assembly 5750_2#5, scaffold ERS096038SCcontig000042, whole genome shotgun sequence (11375 bp)
Overview 1 RT 1: 150-3313 bp Neighborhood of RT #1 [150, 3315] RVT-GII AceF lipoamide_DH PRK14843 Feature: gene Location: 150-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354-513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 54-513 bp Feature: gene Location: 523-2226 bp Feature: domain Description: AceF Location: 526-823 bp Feature: domain Description: AceF Location: 526-823 bp Feature: domain Description: lipoamide_DH Location: 859-2209 bp Feature: domain Description: lipoamide_DH Location: 859-2209 bp Feature: gene Location: 2272-3315 bp Feature: domain Description: PRK14843 Location: 2275-3313 bp Feature: domain Description: PRK14843 Location: 2275-3 3 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK14843 (dihydrolipoamide acetyltransferase; Provisional), AceF (COG0508), lipoamide_DH (TIGR01350)