myRT

myRT report for GCA_001111025.1_5737_2_9

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Seq: CMTL01000039.1 Streptococcus pneumoniae genome assembly 5737_2#9, scaffold ERS096102SCcontig000039, whole genome shotgun sequence (10725 bp)
Overview 1 RT 1: 911-5514 bp Neighborhood of RT #1 [911, 5514] MFS_MefA_like RVT-GII Feature: gene Location: 911-2089 bp Feature: domain Description: MFS_MefA_like Location: 926-2069 bp Feature: domain Description: MFS_MefA_like Location: 926-2069 bp Feature: gene Location: 3104-3820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3308-3800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3308-3800 bp Feature: gene Location: 4577-4774 bp Feature: gene Location: 4855-5514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MFS_MefA_like (cd06173)

Seq: CMTL01000134.1 Streptococcus pneumoniae genome assembly 5737_2#9, scaffold ERS096102SCcontig000134, whole genome shotgun sequence (5824 bp)
Overview 1 RT 1: 15-4521 bp Neighborhood of RT #1 [15, 4676] COG3942 RVT-GII KOG4768 cas_Csn1 AbiEii COG5340 Feature: gene Location: 15-263 bp Feature: domain Description: COG3942 Location: 24-246 bp Feature: domain Description: COG3942 Location: 2 4-2 46 bp Feature: gene Location: 972-2894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1299-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 99-2 034 bp Feature: domain Description: KOG4768 Location: 2181-2286 bp Feature: domain Description: KOG4768 Location: 2 181-2 2 86 bp Feature: domain Description: cas_Csn1 Location: 2445-2724 bp Feature: domain Description: cas_Csn1 Location: 2 445-2 72 4 bp Feature: gene Location: 3244-4089 bp Feature: domain Description: AbiEii Location: 3343-4042 bp Feature: domain Description: AbiEii Location: 3343-4042 bp Feature: gene Location: 4086-4676 bp Feature: domain Description: COG5340 Location: 4089-4521 bp Feature: domain Description: COG5340 Location: 4089-452 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865)