myRT

myRT report for GCA_001111405.1_9953_5_29

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Seq: CJXH01000002.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 9953_5#29, scaffold ERS223442SCcontig000002, whole genome shotgun sequence (295895 bp)
Overview 1 RT 1: 38137-43409 bp Neighborhood of RT #1 [38137, 43426] type_I_sec_LssB type_I_hlyD type_I_hlyD RVT-UG11 PRK09678 Feature: gene Location: 38137-40317 bp Ori: CIK25207.1 Gene: apxIB_1 Feature: domain Description: type_I_sec_LssB Location: 38197-40270 bp Feature: domain Description: type_I_sec_LssB Location: 381 97-40270 bp Feature: gene Location: 40298-41488 bp Ori: CIK25249.1 Gene: prsE_1 Feature: domain Description: type_I_hlyD Location: 40379-40823 bp Feature: domain Description: type_I_hlyD Location: 40379-40823 bp Feature: domain Description: type_I_hlyD Location: 40862-41486 bp Feature: domain Description: type_I_hlyD Location: 40862-41 486 bp Feature: gene Location: 42031-42804 bp Ori: CIK25369.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 42166-42619 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 421 66-4261 9 bp Feature: gene Location: 42773-42946 bp Feature: gene Location: 43208-43426 bp Ori: CIK25439.1 Gene: ogr Feature: domain Description: PRK09678 Location: 43211-43409 bp Feature: domain Description: PRK09678 Location: 4321 1 -43409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_sec_LssB (TIGR03375), type_I_hlyD (TIGR01843), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: CJXH01000015.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 9953_5#29, scaffold ERS223442SCcontig000015, whole genome shotgun sequence (148611 bp)
Overview 1 RT 1: 89073-94415 bp Neighborhood of RT #1 [89073, 94699] met_A_Alw26 RVT-GII DDE_Tnp_1 Feature: gene Location: 89073-91325 bp Ori: CIL48970.1 Feature: domain Description: met_A_Alw26 Location: 89400-91101 bp Feature: domain Description: met_A_Alw2 6 Location: 89400-91101 bp Feature: gene Location: 91318-91914 bp Feature: gene Location: 92402-92803 bp Ori: CIL49046.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92408-92663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 408-92 663 bp Feature: gene Location: 93090-93527 bp Feature: gene Location: 93857-94699 bp Ori: CIL49106.1 Feature: domain Description: DDE_Tnp_1 Location: 93869-94415 bp Feature: domain Description: DDE_Tnp_1 Location: 93869-94415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT met_A_Alw26 (TIGR02987), RVT-GII, DDE_Tnp_1 (pfam01609)