myRT

myRT report for GCA_001113045.1_6840_3_21

Download annotations/find similar RTs

Seq: CLAB01000003.1 Streptococcus pneumoniae genome assembly 6840_3#21, scaffold ERS021331SCcontig000003, whole genome shotgun sequence (123077 bp)
Overview 1 RT 1: 73032-79662 bp Neighborhood of RT #1 [73032, 79662] PRK04813 MFS_MefA_like RVT-GII GIIM Feature: gene Location: 73032-74582 bp Feature: domain Description: PRK04813 Location: 73050-74577 bp Feature: domain Description: PRK0481 3 Location: 73050-74577 bp Feature: gene Location: 75048-76226 bp Feature: domain Description: MFS_MefA_like Location: 75063-76206 bp Feature: domain Description: MFS_MefA_like Location: 75063-76206 bp Feature: gene Location: 76686-77963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76890-77505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76890-77505 bp Feature: domain Description: GIIM Note: maturase Location: 77559-77772 bp Feature: domain Description: GIIM Note: maturase Location: 77559-77772 bp Feature: gene Location: 78725-78922 bp Feature: gene Location: 79003-79662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04813 (D-alanine--poly(phosphoribitol) ligase subunit DltA), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388)

Seq: CLAB01000008.1 Streptococcus pneumoniae genome assembly 6840_3#21, scaffold ERS021331SCcontig000008, whole genome shotgun sequence (79548 bp)
Overview 1 RT 1: 8919-18203 bp Neighborhood of RT #1 [8919, 18358] TraC-F-type Peptidase_M23 Phage_lysozyme2 COG3942 RVT-GII cas_Csn1 AbiEii COG5340 Feature: gene Location: 8919-11270 bp Feature: domain Description: TraC-F-type Location: 9705-11088 bp Feature: domain Description: TraC-F-type Location: 9705-11088 bp Feature: gene Location: 11267-13945 bp Feature: domain Description: Peptidase_M23 Location: 12713-12917 bp Feature: domain Description: Peptidase_M2 3 Location: 12 713-12 917 bp Feature: domain Description: Phage_lysozyme2 Location: 13070-13580 bp Feature: domain Description: Phage_lysozyme2 Location: 13070-13580 bp Feature: domain Description: COG3942 Location: 13655-13928 bp Feature: domain Description: COG3942 Location: 13655-1392 8 bp Feature: gene Location: 14654-16576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14981-15716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14981-15716 bp Feature: domain Description: cas_Csn1 Location: 16127-16406 bp Feature: domain Description: cas_Csn1 Location: 1612 7-16406 bp Feature: gene Location: 16926-17771 bp Feature: domain Description: AbiEii Location: 17025-17724 bp Feature: domain Description: AbiEii Location: 1702 5-1772 4 bp Feature: gene Location: 17768-18358 bp Feature: domain Description: COG5340 Location: 17771-18203 bp Feature: domain Description: COG5340 Location: 17771-182 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), RVT-GII, cas_Csn1 (TIGR01865), AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), TraC-F-type (TIGR02746)