myRT

myRT report for GCA_001114725.1_5919_1_5

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Seq: CMWP01000023.1 Streptococcus pneumoniae genome assembly 5919_1#5, scaffold ERS095990SCcontig000023, whole genome shotgun sequence (31246 bp)
Overview 1 RT 1: 8328-17183 bp Neighborhood of RT #1 [8328, 17185] TraC-F-type Peptidase_M23 Phage_lysozyme2 COG3942 RVT-GII KOG4768 cas_Csn1 AbiEii Feature: gene Location: 8328-10679 bp Feature: domain Description: TraC-F-type Location: 9114-10497 bp Feature: domain Description: TraC-F-type Location: 91 1 4-1 0497 bp Feature: gene Location: 10676-13354 bp Feature: domain Description: Peptidase_M23 Location: 12122-12326 bp Feature: domain Description: Peptidase_M23 Location: 1 21 22-1 2326 bp Feature: domain Description: Phage_lysozyme2 Location: 12479-12989 bp Feature: domain Description: Phage_lysozyme2 Location: 1 2479-1 2989 bp Feature: domain Description: COG3942 Location: 13064-13337 bp Feature: domain Description: COG3942 Location: 1 3064-1 3337 bp Feature: gene Location: 14063-15985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14390-15125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4390-1 51 25 bp Feature: domain Description: KOG4768 Location: 15272-15377 bp Feature: domain Description: KOG4768 Location: 1 5272-1 5377 bp Feature: domain Description: cas_Csn1 Location: 15536-15815 bp Feature: domain Description: cas_Csn1 Location: 1 5536-1 581 5 bp Feature: gene Location: 16335-16550 bp Feature: gene Location: 16604-17185 bp Feature: domain Description: AbiEii Location: 16703-17183 bp Feature: domain Description: AbiEii Location: 1 6703-1 71 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEii (pfam08843), TraC-F-type (TIGR02746)