myRT

myRT report for GCA_001115705.1_5737_5_2

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Seq: CMUA01000056.1 Streptococcus pneumoniae genome assembly 5737_5#2, scaffold ERS096119SCcontig000056, whole genome shotgun sequence (2032 bp)
Overview 1 RT 1: 781-1867 bp Neighborhood of RT #1 [781, 1959] RVT-GII GIIM Feature: gene Location: 781-1959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 985-1600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 985-1 600 bp Feature: domain Description: GIIM Note: maturase Location: 1654-1867 bp Feature: domain Description: GIIM Note: maturase Location: 1 654-1 867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CMUA01000024.1 Streptococcus pneumoniae genome assembly 5737_5#2, scaffold ERS096119SCcontig000024, whole genome shotgun sequence (32728 bp)
Overview 1 RT 1: 8687-15650 bp Neighborhood of RT #1 [8687, 15805] Phage_lysozyme2 PRK08581 RVT-GII cas_Csn1 AbiEii COG5340 Feature: gene Location: 8687-9544 bp Feature: gene Location: 9656-11392 bp Feature: domain Description: Phage_lysozyme2 Location: 10496-11009 bp Feature: domain Description: Phage_lysozyme2 Location: 10496-11009 bp Feature: domain Description: PRK08581 Location: 11126-11375 bp Feature: domain Description: PRK08581 Location: 1112 6-11375 bp Feature: gene Location: 12101-14023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12428-13163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 42 8-13163 bp Feature: domain Description: cas_Csn1 Location: 13574-13853 bp Feature: domain Description: cas_Csn1 Location: 13574-13853 bp Feature: gene Location: 14373-15218 bp Feature: domain Description: AbiEii Location: 14472-15171 bp Feature: domain Description: AbiEii Location: 14472 -15171 bp Feature: gene Location: 15215-15805 bp Feature: domain Description: COG5340 Location: 15218-15650 bp Feature: domain Description: COG5340 Location: 152 18-15650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865), AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)