myRT

myRT report for GCA_001117585.1_5919_1_9

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Seq: CMWU01000004.1 Streptococcus pneumoniae genome assembly 5919_1#9, scaffold ERS095994SCcontig000004, whole genome shotgun sequence (72630 bp)
Overview 1 RT 1: 8934-18218 bp Neighborhood of RT #1 [8934, 18373] TraC-F-type Peptidase_M23 Phage_lysozyme2 COG3942 RVT-GII AbiEii COG5340 Feature: gene Location: 8934-11285 bp Feature: domain Description: TraC-F-type Location: 9720-11103 bp Feature: domain Description: TraC-F-type Location: 9720-1 1 1 03 bp Feature: gene Location: 11282-13960 bp Feature: domain Description: Peptidase_M23 Location: 12728-12932 bp Feature: domain Description: Peptidase_M23 Location: 1 2728-1 2932 bp Feature: domain Description: Phage_lysozyme2 Location: 13085-13595 bp Feature: domain Description: Phage_lysozyme2 Location: 1 3085-1 3595 bp Feature: domain Description: COG3942 Location: 13712-13943 bp Feature: domain Description: COG3942 Location: 1 371 2-1 3943 bp Feature: gene Location: 14669-16591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14996-15731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4996-1 5731 bp Feature: gene Location: 16941-17786 bp Feature: domain Description: AbiEii Location: 17040-17739 bp Feature: domain Description: AbiEii Location: 1 7040-1 7739 bp Feature: gene Location: 17783-18373 bp Feature: domain Description: COG5340 Location: 17786-18218 bp Feature: domain Description: COG5340 Location: 1 7786-1 821 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), RVT-GII, AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), TraC-F-type (TIGR02746)